Kocuria sp. KD4: HBK84_00030
Help
Entry
HBK84_00030 CDS
T06521
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
kod
Kocuria sp. KD4
Brite
KEGG Orthology (KO) [BR:
kod00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kod03032
]
HBK84_00030 (gyrA)
03400 DNA repair and recombination proteins [BR:
kod03400
]
HBK84_00030 (gyrA)
Enzymes [BR:
kod01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HBK84_00030 (gyrA)
DNA replication proteins [BR:
kod03032
]
Prokaryotic type
DNA Topoisomerases
HBK84_00030 (gyrA)
DNA repair and recombination proteins [BR:
kod03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HBK84_00030 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
SHE3
IFT20
Motif
Other DBs
NCBI-ProteinID:
QIR68676
LinkDB
All DBs
Position
7652..10378
Genome browser
AA seq
908 aa
AA seq
DB search
MSDETQDGNGPVDPQDAPEAGDGVVTDEVAITGDRVEQIDLQTEMQRSYLDYAMAVIVGR
ALPDVRDGLKPVHRRVLYTMYDGGYRPDRSFNKCARVVGDVMGNYHPHGDSAIYDALVRL
IQDWIMRYPLALGQGNFGSPGNDGAAAPRYTETKMAPLAMEMVQDIHEDTVDFQDNYDGK
QQEPVVLPARFPNLLVNGSSGIAVGMATNIPPHNLREVADGVQWYLKNPHVDRETLLEEL
IKRIKGPDFPSGAQILGHKGIEQAYRTGRGSITQRAVVNVEEIHNRTCLVVTELPYQVNP
DNLAIKIADLVKEGRVQGIADMRDETSGRTGQRLVIVLKRDAVPKVVLNNLYKHTQLQEN
FSANMLALVDGVPRTLSLDAFVHHWVTHQMEVIVRRTTYRLKQAQEEAHILIGLLKALDA
LDEVIALIRRSPTVEQARTGLMELLEIDEAQAQAILNMQLRRLAALERQKIQDRHAELQR
LIAEYESIIASEERQREIISEELQGIVDHYGDDRRTEVLYGFDGDVSMEDLIPQEQVVVT
ITRDGYVKRTRADEYRAQHRGGRGIKGAQLRGDDVVEHFFVTSTHNWILFFTTLGRVYRV
KAYEFVEAGRDAKGQHVANLMEFQPEERIAQVMELHSYQDAPYLVLATRNGLIKKSRLTD
YDTNRSAGVIAINLRENDELVSAMLVNTDDDVMLISRLGQSLRFTADDDALRPMGRATSG
VTGMKFRPGDELLSANVVSDDSYVFVVTEGGYAKRTSVQEYRVQGRGGLGIKVAKLAEVR
GGQVGGLIVGENDEVLVVMESGKVVRSNVSEVPARGRDTMGVIFAKPGPNDAIVGVARNA
EREIEKEVAEEDAAEATGPSDVAPGSAMDSPEATTADVPAGQDGADAAAPVGDDDAVALE
HNDNGGDA
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacgagacgcaggacggcaacggccccgtggacccgcaggacgcacccgaggcc
ggcgacggcgtcgtgaccgacgaggtggcgatcacgggcgaccgcgtggagcagatcgat
ctccagacggagatgcagcgctcctacctggactacgccatggcggtgattgtggggcgc
gcgctgccggacgtgcgggacggtctcaagcccgtgcaccggcgggtgctctacacgatg
tacgacggcggttaccgccccgatcggtcgttcaacaagtgcgcgcgcgtggtgggcgac
gtgatgggcaactaccacccgcacggtgactccgcgatctacgacgccctggtgcgactg
atccaggactggatcatgcgctacccactcgcgctggggcagggcaacttcggttccccc
ggtaacgacggcgccgcggccccccggtacaccgagaccaagatggcgcctctggccatg
gagatggtccaggacatccacgaggacaccgtggacttccaggacaactacgacggcaag
cagcaggaacccgtggtgctgcccgcgcggttccccaacctgctggtcaacggctcctca
ggtatcgcggtgggcatggccaccaacatccccccgcacaacctgcgcgaggtcgcggac
ggcgtgcagtggtacctcaagaacccgcacgtggaccgcgagaccctgctcgaagaactc
atcaagcggatcaagggtccggacttcccctccggggcgcagatcctcggccacaagggc
atcgaacaggcctaccgcaccggtcgtggttccatcacgcagcgcgcggtggtcaatgtg
gaggagatccacaaccgcacgtgcctcgtggtcacggagctgccgtaccaggtcaacccg
gacaacctggccatcaagatcgcggacctcgtcaaggaagggcgggtccagggcatcgcc
gacatgcgcgacgagacctcggggcgcacgggtcagcggttggtgatcgtgctcaagcgg
gacgccgtacccaaggtcgtgctcaacaacctctacaagcacacgcagttgcaggagaac
ttctccgcgaacatgctcgcgctcgtggacggggtgccccggacgctgtccctggacgcg
ttcgtgcaccactgggtcacccaccagatggaagtcatcgtccggcgcaccacgtaccgc
ctcaagcaggcgcaggaggaagcgcacatcctgatcggcctgctcaaggccctggacgcc
ctggacgaggtcatcgccctgatccggcgctcgcccaccgtggagcaggcacgcaccggg
cttatggagctgctcgagatcgacgaggcccaggcccaggcgatcctcaacatgcagttg
cgccgcctggccgcgctcgaacggcagaagatccaggaccggcacgccgagctgcagcgg
ttgatcgccgagtacgagtcgatcatcgcgtccgaggagcgtcagcgcgagatcatctcg
gaggaactgcagggcatcgtggaccactacggtgacgaccgccgcaccgaggtgctctac
ggcttcgacggggacgtctccatggaggacctcatcccgcaggagcaggtcgtcgtgacc
atcacgcgcgacggctatgtcaagcgaacccgcgcggacgagtaccgcgcccagcaccga
ggtggccgcggcatcaagggcgcgcagttgcgcggcgacgacgtcgtggagcacttcttc
gtgacgagcacccacaactggatcctgttcttcacgaccctcgggcgtgtctaccgcgtc
aaggcctacgagttcgtggaggccggccgggacgcaaagggccagcacgtggccaacctc
atggagttccagcccgaggaacgcatcgcccaggtcatggagctgcactcctaccaggac
gccccgtacctcgtgctcgcgacccgcaacgggttgatcaagaagtcgcggctcacggac
tacgacaccaatcgttccgcgggcgtgatcgcgatcaacctgcgcgagaacgacgagttg
gtctcggccatgctcgtgaacaccgacgacgacgtcatgctgatctcgcgcctgggccag
tccctgcggttcaccgctgacgacgacgccctgcgccccatgggtcgcgcgacctccggt
gtcacgggcatgaagttccgccccggggacgagttgctctccgccaacgtggtcagcgac
gactcctacgtgttcgtggtgaccgagggcggctacgccaagcgcacgagcgtccaggag
taccgcgtgcagggccgcggtggcctgggcatcaaggttgccaaactcgccgaggtccgc
ggtggccaggtgggcgggctgatcgtgggcgagaacgacgaggtgctcgtggtcatggag
agcggcaaggtcgtgcgctccaacgtgagcgaggtccccgcccgcggccgcgacacgatg
ggtgtgatcttcgccaagccgggtcccaacgacgccatcgtgggggtcgcccgcaacgcc
gagcgggagatcgagaaggaggtcgcggaggaggatgccgccgaggccaccgggccgagc
gacgtcgcccccggctccgcgatggactcccccgaagccacgaccgcggacgtccccgcg
ggccaggacggtgccgacgccgctgcgccggtcggtgacgacgatgcagtagcgttggag
cacaacgacaacggaggtgacgcatga
DBGET
integrated database retrieval system
