Kocuria sp. KD4: HBK84_01520
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Entry
HBK84_01520 CDS
T06521
Name
(GenBank) DNA polymerase III subunit gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
kod
Kocuria sp. KD4
Pathway
kod03030
DNA replication
kod03430
Mismatch repair
kod03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kod00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HBK84_01520
03430 Mismatch repair
HBK84_01520
03440 Homologous recombination
HBK84_01520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kod03032
]
HBK84_01520
03400 DNA repair and recombination proteins [BR:
kod03400
]
HBK84_01520
Enzymes [BR:
kod01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HBK84_01520
DNA replication proteins [BR:
kod03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HBK84_01520
DNA repair and recombination proteins [BR:
kod03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HBK84_01520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
DNAX_ATPase_lid
AAA_22
RuvB_N
AAA_30
Rad17
AAA_14
AAA_19
Mg_chelatase
AAA_5
AAA_18
AAA_28
zf-CXXC
AAA_16
nSTAND3
ORC-CDC6-like
AAA_2
Motif
Other DBs
NCBI-ProteinID:
QIR68915
LinkDB
All DBs
Position
complement(337416..341054)
Genome browser
AA seq
1212 aa
AA seq
DB search
MTTALYRRYRPETFQDVIGQEHVTEPLMTALRKNRVNHAYLFSGPRGCGKTTSARILARC
LNCAEGPTATPCGHCESCQDLARDGAGSLDVIEMDAASHGGVDHARDLRERATFAPVRDR
YKIFIIDEAHMVTREGFNALLKIVEEPPEHVKFIFATTEPSKVLTTIRSRTHHYPFRLVP
PEPLMRYLEQLCQEEGVTTEPGVLSLVVRAGGGSVRDSLSVLDQLMAGSDDGGITYDLAV
ALLGYTHAALLDDVVDAFAAGDAATVFASVDRVIQTGQDPRRFVEDLLERFRDLVVVNSV
PDSAANILHGMPTDQINRLRNQATQLGAAELSRSADITNEALNEMTGATSPQLHLELLCA
RILLPSADHTTRGITSRVDRLERRLSIPRGTGIRTTAHDAASSSPAVEPTARGSQEPTSP
EQSGTAAPAPASYDAPAPESAGVPSPIPPELDAAAKDSVAPSQPVGPDGSAADGADGSAT
GRPAEETPDVQEPTDPQDESEQPEGSSHPAAADPVPEGERSPDAQHPPADGTTDTRSPAS
QDARADVSARMQQRETSNQYGSQRPEDDTSRQYAQGEPRRDVAPHDDHQPQTPQASEEQA
APRDVTSGELELLRSSWPEIVSALAEIRRVAWAITVRGTPISFENRTLRIAFENDGDLLN
FPRFEADVRNAIQSVVGLDCAVEAVRPGDTRGRQDTPGAGGPPSNAGRGTGPGPGRDGGG
GQGYRGDRPAPRGGGPQNAQGSRQDRGSQQDRSYQRDDSASEHGQPYGPGPRQGSDSHDG
ADAGYGSGSRRDTGASRGDGPTGRDTRLNASGQAGSSDQPDYFREPEGFGVNRRRGNPPA
PDREPTPERESRSMPDSASRSTSGTDRSSVPASSSHSAPASAPDDDEPVTSWSVASIPQP
GFAAPSGGDSTSNTANAAPTRDDSDQNPDTSDSSVGDSSRDDAHRATDSPADDRAGTGDS
TSVPSREGLGSDSDSADVGATSWTPGAPASDGPGSDVPASDDSAAFKSHDSGAGTSGPDL
SMRDGSMRDGSVRDGSVPEDPASGAPSFRAPQPRDRGPEYWSPEEPPPPPEDDPPADMYD
EPVPRAPSPARDRRAQGGNGPGGDNPAGPGPDHDGRGNTRPGGVVPRENGDTRPGGNRPS
WRERHAEAIAAAERRSTDIAPPTSRSPGMEDENFVPGADDESLEDSSLYGRAAIERILGG
MLIDEHAHGTDQ
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
gtgactaccgccctgtaccgccgctatcgcccggagacctttcaggatgtcatcggtcag
gaacacgtgaccgagcccctgatgaccgcgctgcgcaagaacagggtcaatcacgcctat
ctcttctccggtccgcgcggctgcggtaagaccacgtccgcgcgcatcctggcccgctgc
ctcaactgcgcggaagggcccacggccacaccgtgcggtcactgcgagtcctgccaggat
ctggcccgggacggtgccggctcactggacgtcatcgagatggacgcggcctcccacggc
ggcgtggatcatgcccgtgacctgcgggaacgcgccacgttcgcccccgtccgggaccgc
tacaagatcttcatcatcgacgaggcccacatggtcacgcgggagggcttcaacgccctg
ctgaagatcgtggaggaaccgccggagcacgtgaagttcatcttcgccaccaccgagccc
tccaaggtgctcaccaccatccgctcccgcacgcaccactaccccttccgcctcgttccc
ccggaaccgctcatgcgctacctcgagcagctgtgccaggaggagggcgtcaccaccgaa
ccgggcgtcctgtccctcgtggtgcgcgccggcggcggctcggtgcgtgattcgctctcc
gtcctggatcagctcatggccggctccgacgacggcggcatcacctacgatctcgcggtc
gccctgctgggctacacgcacgcggccctgctcgacgacgtcgtggacgccttcgccgcc
ggcgacgccgccacggtcttcgcgtccgtggaccgcgtcatccaaaccgggcaggacccc
cgccgtttcgtggaggacctgctcgaacgcttccgcgacctggtggtggtcaactcggtc
cccgattccgccgcgaacatcctgcacgggatgcccacggaccagatcaaccggttgcgg
aaccaggccacccagctgggcgcggccgagctctcccgctccgcggacatcaccaacgag
gccctcaacgagatgaccggggccacctccccgcagttgcacctggaactgctgtgcgcc
cgcatcctactgccctcggcggaccacacaacgcgcggcatcacgtcccgggtggaccgt
ttggaacgccgcctgagcattcctcggggcaccggaattcgtacgacggcgcacgacgcc
gcgtcgtcgtcccccgcggtggaaccgaccgcacgcggaagccaggagcccacatctccg
gagcaatccggcaccgccgcgccggcacccgcgtcgtacgacgcccccgcaccggaatcc
gccggggtaccttccccgataccccccgagctcgacgccgccgcaaaggactccgttgcc
ccgtcgcagcccgtgggcccggacgggtccgccgcggacggcgcggacggttccgcaacg
ggtcgccccgcggaggagaccccggatgtccaggaacccacggacccgcaggacgagtcc
gaacagcccgagggcagcagccaccccgccgctgcggatcccgttccggaaggcgagcgc
agccccgacgcccagcacccgcccgcggacggcacgaccgacacccgctcccccgcgtca
caggacgcgagagccgatgtctcggcacgcatgcagcaacgggagacgtcgaaccagtac
gggtcccagcggcctgaagacgacacatcccgccagtacgcgcagggggagcctcgccgt
gacgtcgcgccacacgatgaccaccagccgcaaaccccgcaggcgtccgaggagcaggcc
gccccgagagacgtcaccagcggtgaactggaactgctgcgttcctcgtggcccgagatc
gtgtccgcgctcgcggagatccgccgcgtggcctgggccatcaccgtgcgaggaacgccc
atctcgttcgagaaccgcactctgcggatcgcgttcgagaacgacggcgacctcctgaac
ttcccccgcttcgaggcggacgtccgtaatgccatccagagcgtggtggggttggattgt
gcagtggaagcagtgcgccccggtgacacacgcggccggcaggacaccccgggtgcgggt
ggtccgccgtcgaacgccggccgtggcaccgggcccggccccgggcgggacggcggcggt
ggacagggttaccggggagatcgccccgcgccccggggcggcgggccccagaacgctcaa
ggatcccggcaggaccgcggatcgcagcaggaccggagttatcaacgcgacgattccgcc
tcggagcacggccaaccgtacggccccggaccccgtcagggctcggactcgcatgacggc
gctgatgccgggtacggatccggctcacggcgagacaccggtgcatctcgcggcgatgga
cccaccgggcgggacaccaggctgaacgcctcgggccaggccggatcctccgaccaaccg
gactatttccgcgagccggagggcttcggggtcaatcgtcgtcggggcaatcctcccgcg
cccgaccgtgaaccgacaccggaacgcgagtcgcggtccatgcccgattccgcctctcgt
tccacatccggcactgaccggtcctccgtgcctgcttcctcgtcgcactcggcgcccgca
tccgccccggacgacgacgaacccgtcacctcgtggtccgtggcctccattccccaaccg
ggtttcgccgcaccgagcggcggggattccacgtcgaacaccgccaatgcggcgcccacg
cgtgatgattcggaccagaatccggacacgtccgatagctccgtgggcgactcctccagg
gacgatgcccaccgagcgacggattccccggcggacgaccgcgctggcaccggcgattcc
acctcggttccgtctcgtgagggcttgggcagtgacagtgactccgcggacgtcggcgcg
acctcgtggacccccggtgcccccgcgtcggatggccccgggtcggatgttcccgcttcc
gatgactccgcggcgttcaagtcccacgattccggggccgggacgagcggacccgatctg
tccatgcgtgacggttccatgcgggatggttccgtgcgcgacggctccgtgcccgaggat
cccgcatccggtgctccttccttccgtgccccgcagccgcgggatcgcggcccggagtac
tggagcccggaggaaccgccgcccccaccggaggatgaccccccggcggacatgtacgac
gaacccgtgccccgagcgccgtcgcccgcgagggatcgtagggcccagggcgggaacggc
cccggcggcgacaacccggcgggtcccggtcccgaccacgatgggcgcgggaacacccgc
cccggcggcgtcgtccctcgcgagaacggcgacacccgccccggcgggaaccgcccgagc
tggcgagagcgccacgcggaagcgattgccgcggcggaacggcgctccaccgacatcgcg
cccccgacctcgcgcagccccggcatggaggacgagaacttcgtcccgggcgcggacgac
gaatccctcgaggactcgtccctgtacgggcgggcggccatcgagcgcatcctgggcggc
atgctcatcgacgagcacgcccacggaacggatcagtga
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