KEGG   Kocuria sp. KD4: HBK84_01955
Entry
HBK84_01955       CDS       T06521                                 
Name
(GenBank) integration host factor
  KO
K03530  DNA-binding protein HU-beta
Organism
kod  Kocuria sp. KD4
Brite
KEGG Orthology (KO) [BR:kod00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:kod03032]
    HBK84_01955
   03036 Chromosome and associated proteins [BR:kod03036]
    HBK84_01955
   03400 DNA repair and recombination proteins [BR:kod03400]
    HBK84_01955
DNA replication proteins [BR:kod03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    HBK84_01955
Chromosome and associated proteins [BR:kod03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    HBK84_01955
DNA repair and recombination proteins [BR:kod03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      HBK84_01955
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG DUF2267
Other DBs
NCBI-ProteinID: QIR68983
LinkDB
Position
432783..433067
AA seq 94 aa
MAMNRSELVAEVAEKSGSTQAAVNGVLDSLFQVFESSVSKGEKITIPGWLSVERTDRAAR
QGRNPQTGEAIQIPAGHGVKLTAGSKLKAAVSSK
NT seq 285 nt   +upstreamnt  +downstreamnt
atggctatgaaccgcagcgaactcgttgcagaggttgccgagaagtccggtagcacccag
gccgccgtcaacggcgttctcgactccctgttccaggttttcgagagctccgtttccaag
ggcgagaagatcaccatccccggctggctctccgtggagcgcaccgaccgcgccgcgcgt
cagggtcgcaacccgcagaccggcgaggccatccagatcccggctggacacggtgtcaag
ctcactgcgggctccaagctgaaggctgctgtttcctccaagtga

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