Kocuria sp. KD4: HBK84_04150
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Entry
HBK84_04150 CDS
T06521
Symbol
selB
Name
(GenBank) selenocysteine-specific translation elongation factor
KO
K03833
selenocysteine-specific elongation factor
Organism
kod
Kocuria sp. KD4
Brite
KEGG Orthology (KO) [BR:
kod00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
kod03012
]
HBK84_04150 (selB)
Translation factors [BR:
kod03012
]
Eukaryotic type
Elongation factors
HBK84_04150 (selB)
Prokaryotic type
HBK84_04150 (selB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
WHD_3rd_SelB
Beta-barrel_SelB
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Sas-5-like_implico
Motif
Other DBs
NCBI-ProteinID:
QIR69355
LinkDB
All DBs
Position
893208..894995
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AA seq
595 aa
AA seq
DB search
MYVVATAGHVDHGKSTLVRALTGIEPDRWDEEKRRGLTIDLGFAWTELPSGRHVAFVDVP
GHERFLGNMLAGVGPAPVVCFVVAADEGWQAQSRDHRDAVAALGIEYGMIVVTKADRAPE
RVADVVARARAELAHTGLADAPAVAVSAREGTGLDEFRDTLDAVLSRVPGPDPDARIRLW
IDRAFTISGAGTVITGTLTAGTLHTGDRLTLRGRTGKQEVAVRSIQSQNDSVARIGPTHR
VAVNLRGTSKDAIHRGDVLVTPDAWPSAGVIEVRRERGAPFDELPAEIVVHAGTAGVGAR
LRPLDADHARLQLDHEMTLVPGDRLVLRSPGAQVAVGGARVLDVDPPTLDRRGAAARETA
RLGGIADHGDPVAETVKYGAVSTERLRLLGFAADETPSGDVVVADGWWIHVPRLTEWATQ
LRAAVEAAHERDPLAPGLTRGAARTALGEPGGRLLDMLVARAQLTEQDGYITVPGRGGGL
GAAEAAITALEKRLRADPFAAPEAYELQELRLGPRELAAAQRLGRVLRLPGDVVLLPTAP
ALAMRELARLPQPFTTSQARQAWGTTRRVAVPLLEHLDAKGWTRREDGSNRSIVR
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgtatgtcgtggccacggccggtcacgtggaccacggcaagtccaccctggtccgagca
ctcacggggatcgaaccggaccggtgggacgaggagaagcgacgcgggctcacgatcgac
ctcgggttcgcgtggaccgagctgccctcggggaggcatgtggcgttcgtggacgtcccc
gggcacgagcggttcctgggcaacatgcttgccggtgtgggcccggctccggtggtgtgc
ttcgtggtggccgcggacgagggctggcaggcccagtcccgcgaccaccgggatgcggtc
gctgctctcgggatcgagtacgggatgatcgtggtgactaaggcggatcgggctccggag
cgggtggccgacgtcgtggcgcgggcgcgcgcggagctcgcccacacgggtctcgcggac
gctcccgccgtggccgtctcggcgcgggagggaaccggactcgacgagttccgggacacg
ctggacgcggtgctctcccgcgtgcccggcccggacccggacgccaggatccggttgtgg
atcgaccgggccttcacgatttccggtgccgggaccgtgatcaccgggaccctgaccgcc
gggaccctgcacacgggtgaccggttgaccctgcgcggtcgaacgggaaagcaagaggtc
gccgtgcgctcgatccagagtcagaatgattccgtggcgcggatcggacccacccaccgc
gtggccgtgaacctgcggggcacgagcaaggacgcgatccaccgtggggacgtgctcgtg
accccggacgcgtggccgagcgcgggcgtcatcgaggtccgccgtgagcggggtgctccg
ttcgacgaactgcccgccgagatcgtggtgcacgcgggaaccgccggcgtgggcgctcgg
ttgcgaccgctcgatgccgatcacgcccgattgcagctggaccacgagatgaccctcgtg
ccgggggaccggctcgtgctgcgcagtcccggggcgcaggtcgcggtcgggggtgcacgt
gtgctcgacgtcgacccgcccaccttggaccggcgcggtgcggccgcccgggagaccgct
cggctcgggggcatcgccgaccacggcgaccccgtggcggaaaccgtcaagtacggggcg
gtgagcaccgagcggttgcggctgctggggttcgcggcggacgagacgccctccggcgac
gtcgtcgtagcggacggatggtggatccacgtgccccggctcacggagtgggccacgcag
ttgcgagcggcggtcgaggccgcgcacgagcgcgaccccctggccccgggactgacccga
ggcgcggcccgcacagcgctcggcgaacccggcggacggctcctggacatgctcgtggcc
cgggcgcagctcacggagcaggacggatacatcacggtccccggtcgcggcggcggactc
ggtgccgcggaggccgcgatcaccgcgctcgagaagcgcttgcgtgcggatccgttcgcg
gcaccggaggcgtacgaactgcaggagttgcgcctcggcccgcgagaattggcggcggcg
cagcggctcggtcgggtgctgcggttacccggcgacgtcgtcctgttgcccaccgcgccc
gcgctcgcgatgcgcgagctcgcgcggctgccccagcccttcaccacgagccaggcgcgg
caggcgtggggcaccacgcgccgggtggccgtaccgctgctcgaacacctggacgccaag
ggctggacgcggcgcgaggacgggagcaaccgcagcatcgtgcggtga
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