Kocuria sp. KD4: HBK84_04175
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Entry
HBK84_04175 CDS
T06521
Name
(GenBank) mismatch-specific DNA-glycosylase
KO
K03649
double-stranded uracil-DNA glycosylase [EC:
3.2.2.28
]
Organism
kod
Kocuria sp. KD4
Pathway
kod03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
kod00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HBK84_04175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kod03400
]
HBK84_04175
Enzymes [BR:
kod01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.28 double-stranded uracil-DNA glycosylase
HBK84_04175
DNA repair and recombination proteins [BR:
kod03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HBK84_04175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QIR69359
UniProt:
A0A6G9V1X3
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All DBs
Position
898211..898828
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AA seq
205 aa
AA seq
DB search
MGFSRAELDSYRDRTVPDLLPQPLRLLFVGINPGLWTAATGAHFARPGNRFYPALHRAGI
TPTLINAADGYVPEELAQLTDRGIGISNVCPRATARADELTAEEFHEGAQRLDRLVRAEH
PAVVAVLGITAYRAAFDRPKAVTGRQDSPWPGTELFVAPNPSGLNAHSSLDDLARIYGDI
ARAAGIAVDSEDTPRSVEPRDVKHP
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgggattctcacgcgccgaactcgactcctaccgggatcgcactgtcccggatctgctg
ccccagccgttgcggctgttgttcgtgggaatcaacccggggctgtggaccgccgcgacc
ggtgcgcacttcgcccggccgggtaaccggttctacccggcgctgcaccgcgcggggatc
accccgaccctgatcaacgccgccgacggctacgtcccggaggagctggcgcaactgacc
gaccgggggatcgggatcagcaacgtgtgtccccgggccactgcgcgggcggatgagctc
accgcggaggagttccacgagggggcacagcggctggaccgactggtccgcgcggagcat
cccgccgtggttgcggtgctcggcatcaccgcgtaccgcgcggcctttgaccgccccaag
gccgtcacgggtcggcaggattcaccgtggccgggcaccgaactgttcgtggcacccaac
cccagcggtctcaacgcccacagctccctggacgacctcgcgcggatctacggtgacatc
gcccgcgccgcgggcatcgccgtcgactcggaggacacccctcgaagcgttgaacctcgg
gatgtcaaacacccttga
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