Kocuria sp. KD4: HBK84_04220
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Entry
HBK84_04220 CDS
T06521
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
kod
Kocuria sp. KD4
Pathway
kod03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
kod00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HBK84_04220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kod03400
]
HBK84_04220
Enzymes [BR:
kod01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
HBK84_04220
DNA repair and recombination proteins [BR:
kod03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HBK84_04220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QIR69368
LinkDB
All DBs
Position
906524..907396
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AA seq
290 aa
AA seq
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MAENPQTLLPHPLTGRLFPSPVPPGTGWPEDPARADTPVAHDAARVRELAAGASDVEQLN
ALCSVCRTCERLVEWREDVAEHKRASFAGEPYWGRPVPSYGDPMARLVIVGLAPAANGGN
RTGRMFTGDRAGDWIYAALYRAGFAANETVSTAGDGQTLRGVRMIAPVRCAPPANKPAPD
EKAACRGWFEREIALLPHLESMLALGGIAWQTTLAAAARMGWDVPRPRPKFGHGAVARLR
TPEGRTVRLVGCYHVSQRNTFTGLLTREMLDDVMALAAAPASGEEESGEA
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atggccgagaacccccagacgctcctgccccacccgctcaccgggcggctcttcccgtcc
ccggtgccgcccgggaccgggtggccggaggaccccgcgcgagcggacacacccgtggcc
cacgacgccgcccgggtgcgtgagctcgcggcgggggcgagcgacgtcgaacagctcaat
gccctgtgcagcgtgtgtcgcacgtgcgagcggctcgtcgaatggcgggaggacgtggcc
gagcacaagcgggcgtcgttcgcgggggaaccgtactgggggcgcccggtgccgtcctac
ggggaccccatggcgcggctcgtgatcgtgggtctcgcgcccgcggcgaacgggggcaat
cggacggggcggatgttcacgggggatcgcgccggggactggatctacgcggcgctgtac
cgcgcagggttcgcggcgaacgagaccgtgagcaccgcgggggacgggcagaccctgcgc
ggcgtgcggatgatcgccccggtgcgctgcgcgccgcccgccaacaagcccgcaccggac
gagaaggcggcgtgcagaggttggttcgagcgggagatcgcgctgctcccgcatctcgag
agcatgctcgcgctcgggggcatcgcgtggcagacgaccctggccgccgcggcgcgcatg
ggttgggacgtgccccgaccgcgccccaagttcggccacggcgccgtcgcccggttgcgc
acgccggaaggccgcacggtgcgactcgtggggtgctaccacgtgagccagcgcaacacg
ttcacgggcctgctcacgcgtgagatgctcgacgacgtcatggccctcgccgcggccccc
gcctcaggggaggaggagtctggcgaggcctga
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