Kocuria sp. KD4: HBK84_04265
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Entry
HBK84_04265 CDS
T06521
Name
(GenBank) NADP-dependent isocitrate dehydrogenase
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
kod
Kocuria sp. KD4
Pathway
kod00020
Citrate cycle (TCA cycle)
kod00480
Glutathione metabolism
kod00720
Other carbon fixation pathways
kod01100
Metabolic pathways
kod01110
Biosynthesis of secondary metabolites
kod01120
Microbial metabolism in diverse environments
kod01200
Carbon metabolism
kod01210
2-Oxocarboxylic acid metabolism
kod01230
Biosynthesis of amino acids
kod04146
Peroxisome
Module
kod_M00009
Citrate cycle (TCA cycle, Krebs cycle)
kod_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
kod00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
HBK84_04265
09102 Energy metabolism
00720 Other carbon fixation pathways
HBK84_04265
09106 Metabolism of other amino acids
00480 Glutathione metabolism
HBK84_04265
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
HBK84_04265
Enzymes [BR:
kod01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
HBK84_04265
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Gene cluster
GFIT
Motif
Pfam:
IDH
DUF2383
CAMP_factor
Motif
Other DBs
NCBI-ProteinID:
QIR69377
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Position
complement(913189..915402)
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AA seq
737 aa
AA seq
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MPKIIYTETDEAPLLATYSFKPIVEAFASTAGVEVETRDISLAARILAQFPDRLTDEQRV
PDTLAELGELVETPEANIVKLPNISASIPQLKATIKELQADGYDLPDYPEVATSDEAKDI
RARYDRVKGSAVNPVLREGNSDRRAPKAVKNYARQHPHSMGAWSKDSKTNVATLGHDDFR
SNEKSVIIPEDDTLTIQLVTDRGTTMLKESLPVLAGEVVDGTFMSATALDAFLAEQVARA
KSEDVLFSTHLKATMMKVSDPIIFGHVVTAFFRDVFDRYGEDLAKAGLSPNDGLGGILSG
LDALDNGQEIKAAFDKAIDEGPELAYVNSDKGITNLHVLSDVIVDASMPAMIRTSGKMWG
REGEQKDTLAVLPDSSYAGVYQVVIDDCRENGAFDPTTMGTVPNVGLMAQKAEEYGSHDK
TFEIQDAGTVQVVNGAGEVLLSHEVQPGDIWRACQAKDAPIKDWVQLAVRRSRDSGMPAV
FWLDESRAHDRNLITKVEQYLAEEDTDGLDLRILSPAEATKFTVERLRRGEDTISVTGNV
LRDYLTDLFPILELGTSAKMLSIVPLMNGGGLFETGAGGSAPKHVQQLQEENHLRWDSLG
EFLALAASFEHLASRHDNAKAQVLADTLDRATGTFLNENKSPSRKVNELDNRGSHYYLAM
FWAEELAQQTEDSELAQAFQKVASELRENEDTINAELLDVQGSPADLGGYYWPVPEKVSA
VMRPSATLNEIVDGLSA
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagatcatctacaccgagaccgacgaagcacccctgctcgctacgtactcgttc
aagccgatcgtggaggcgttcgcgtccaccgccggtgtggaggtggagacccgagacatt
tccctggccgcgcgcatcctggcccagttcccggaccgcctcaccgacgagcagcgggtc
ccggacaccctggccgagctgggcgaactcgtggagaccccggaagcgaacatcgtcaag
ctgccgaacatctccgcgtccatcccgcagctgaaggccaccatcaaggagttgcaggcg
gacggctacgacctgccggactaccccgaggtcgccacctcggacgaggccaaggacatc
cgcgcgcgttacgaccgtgtcaagggctccgccgtgaaccccgtgctgcgcgagggcaac
tcggaccgccgtgcccccaaggccgtgaagaactacgcccggcagcacccgcactccatg
ggcgcgtggagcaaggactccaagaccaacgtggccaccctcggccacgacgacttccgc
agcaacgagaagtccgtgatcatccccgaggacgacaccctgaccatccagctcgtcacc
gaccggggcaccacgatgctcaaggagtccttgcccgtactggccggtgaggtcgtggac
ggcaccttcatgagcgccaccgcgctggacgcgttcctcgcggagcaggtggcccgcgcc
aaatccgaggacgtcctgttctccacccacctcaaggccaccatgatgaaggtctccgac
cccatcatcttcggccatgtggtcaccgcgttcttccgggacgtcttcgaccgctacgga
gaggacctcgccaaggcggggctgtcccccaacgacggcctgggtggaatcctctcgggc
ctggacgccctggacaacggccaggagatcaaggccgcgttcgacaaggcgatcgacgag
ggccccgagttggcctacgtgaactcggacaagggcatcaccaatctccacgtgctctcg
gacgtgatcgtggacgcctccatgcccgccatgatccgcacgtccggaaagatgtggggt
cgcgagggcgagcagaaggacaccctggccgtgttgccggactcctcttacgcgggggtc
taccaggtcgtgatcgacgactgtcgcgagaacggcgcgttcgatcccacgaccatgggt
accgtccccaatgtgggtttgatggcacagaaggccgaggagtacggctcgcacgacaag
accttcgagatccaggacgctggcaccgtccaggtggtcaacggtgccggtgaggtgctg
ttgtcccacgaggtccagcccggtgacatctggcgtgcgtgccaggccaaggacgccccc
atcaaggactgggtgcagctggccgtgcggcgttcccgcgactccgggatgcccgccgtg
ttctggctggacgagtcccgcgcccacgaccgcaacctgatcaccaaggtggagcagtac
ctcgcggaggaggacaccgacggtctggacctgcggatcctctcccccgcggaggccacc
aagttcacggtggagcggctgcgccgcggcgaggacaccatctcggtgaccggcaacgtg
ctgcgcgactacctcacggacctgttccccatcctggaactgggcacgtccgccaagatg
ctgtccattgtgccgctcatgaacggcggtggcctgttcgagaccggcgccggtggttcc
gcgcccaagcacgtgcagcagctgcaggaggagaaccacctgcgctgggattccctgggt
gagttcctggcgctcgccgcgtccttcgaacacctcgccagccgccacgacaacgccaag
gcgcaggtcctcgcggataccctggaccgcgcgaccgggaccttcctcaacgagaacaag
tccccgtcccggaaggtcaacgagctcgacaaccgcggttcgcactactacctggccatg
ttctgggccgaagagctcgcgcagcagaccgaggactccgagctcgcgcaggcgttccag
aaggtcgcttccgagctgcgcgagaacgaggacaccatcaacgccgaactgctggacgtg
cagggttcccccgcggatctcggcgggtactactggcccgtcccggagaaggtctccgcg
gtgatgcgcccctccgccacgctcaacgagatcgtggacgggctcagcgcctga
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