Kocuria sp. KD4: HBK84_04400
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Entry
HBK84_04400 CDS
T06521
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
kod
Kocuria sp. KD4
Pathway
kod00300
Lysine biosynthesis
kod01100
Metabolic pathways
kod01120
Microbial metabolism in diverse environments
kod01230
Biosynthesis of amino acids
Module
kod_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
kod00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HBK84_04400
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
kod01002
]
HBK84_04400
Enzymes [BR:
kod01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
HBK84_04400
Peptidases and inhibitors [BR:
kod01002
]
Metallo peptidases
Family M20
HBK84_04400
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
QIR69399
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All DBs
Position
945196..946299
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AA seq
367 aa
AA seq
DB search
MSSDASVTLDLTMDPADLTAALVDVESVSDHEGPLADAVETALRALPHLSVHRDGDTVIA
RTDRGRDERVILAGHLDTVPLPTVEGSLGGVPATRRREADGDVIYGRGTTDMKGGVAVQL
VLAHELTEPNRDVTYVFYDHEEVSSDASGLGRVMRNSPELLEADFAVLLEPTNGTVEGGC
NGTMRFRITTHGKAAHSGRSWIGENAIHKQAEVLARLSAYEARTVTVEGLDYREGLNAIR
IGGGVAGNVIPDTAWVEVNYRFAPDKSLEQAQDHMREVFTGYELEWQDLSPAARPGLDRP
SAAQFVAAVGREPMPKYGWTDVARFSEAGVPAVNFGPGDALLAHTDDEHVFDDAVRACHR
ALASWLS
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgagctcagacgcttccgtgaccctcgacctcaccatggatcccgcggatctgaccgcc
gcgctcgtggacgtggagtccgtgtccgatcacgagggccccctggccgacgccgtcgaa
acagccctgcgcgctctgccccatctcagtgtccaccgggacggggacaccgtgatcgcc
cgcacggaccgcggccgagacgaacgcgtgatcctcgccggccacctggacaccgtgccc
ctgcccaccgtggagggatcgctgggcggggtcccggccacgcggcgtcgggaagcggac
ggggacgtgatctacggccgcggcaccaccgacatgaagggcggtgtggccgtccaactg
gtgctcgcgcacgaactcaccgagcccaaccgggacgtcacctacgtgttctacgaccac
gaagaggtctcgagcgatgcgagcgggctgggccgcgtgatgcgcaacagccccgaactg
ctcgaggcggacttcgcggtgctgctcgaaccgaccaacgggaccgtggagggcgggtgc
aacggcaccatgcgtttccggatcacgacccacggcaaggccgcccactccgggcgctcg
tggatcggggagaacgcgatccacaagcaggcggaggtcctggcccggttgagcgcgtac
gaggcgcgcaccgtgactgtggagggcctcgactaccgtgaagggctcaatgcgatccgg
atcggcgggggagtcgcgggcaacgtgatcccggacaccgcgtgggtcgaggtcaactac
cgcttcgccccggacaagtccctcgagcaggcacaggaccacatgcgcgaggtcttcacc
gggtacgagctcgagtggcaggacctctcgccggcggcccgtcccgggctggaccggccc
tccgccgcgcagttcgtggccgccgtggggcgggagcccatgcccaagtacggctggacc
gacgtcgcccgcttctcggaggccggggtgcctgccgtgaacttcggccccggggacgcc
ctgctcgcccacaccgacgacgagcacgtgttcgatgacgccgtccgggcctgccaccgt
gcgctcgcgtcctggttgtcctga
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