Kocuria sp. KD4: HBK84_04975
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Entry
HBK84_04975 CDS
T06521
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
kod
Kocuria sp. KD4
Pathway
kod00300
Lysine biosynthesis
kod00470
D-Amino acid metabolism
kod01100
Metabolic pathways
kod01110
Biosynthesis of secondary metabolites
kod01120
Microbial metabolism in diverse environments
kod01230
Biosynthesis of amino acids
Module
kod_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
kod00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HBK84_04975 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HBK84_04975 (lysA)
Enzymes [BR:
kod01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
HBK84_04975 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QIR69499
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All DBs
Position
1079655..1081085
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AA seq
476 aa
AA seq
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MTELAPAHPLAPAWLQVPADPAALDPVVFTSQYARDDTGCVTVDSVPVTEIAARHGSPSY
VVSERTFRDRARGFREAFEAALNPLGVELEVYYASKALLNTAVARWATEEGLNIDTASGG
ELAVALAAGVAPGRIALHGNNKSAEEVDRALEVGVGRIVVDSLAEIELVARLARDRGTRA
PVMIRVTPGVHASTHEFIATAHEDQKFGLSLNPVQEGEDSPALVAVAACVDASDALDLRG
LHCHIGSQIFAAEGFGQAAERVFALRETVAERWDVTLPEIDLGGGHGVAYTAADSPREVA
AIAADLAPLLASVLESSDLPAPHLSFEPGRFIAGPSGCTVYTVGTVKTVTVSPGVQRRYV
SVDGGMSDNARPVLYDADYTAVLANRVSEETPVLSRVVGKHCESGDIVVKDVYLPGDVTA
GDLLVVPVTGAYCWSLSSNYNWLPRPGIVAVAPDGATREIVRRESVSDLLARDTGV
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaactcgctcccgcccacccgctcgccccggcctggctgcaggtccccgcggac
cccgcggcactggaccccgtggtcttcacgtcccagtacgcccgggatgacacggggtgc
gtcaccgtggattccgtgcccgtgaccgagatcgccgcgcgccacggttccccgagctac
gtggtctctgaacggaccttccgggaccgcgcccgcggtttccgcgaggcgttcgaggcc
gccctgaatcctctcggcgtggaactcgaggtctactacgcctccaaggccctgctgaac
accgccgtggcgcggtgggccacggaggagggcctcaatatcgacaccgcctccggcggg
gaactcgccgtggcgctcgccgcgggtgtggccccgggccggatcgcgttgcacggcaac
aacaagtccgcggaggaagtcgaccgggccctcgaggtgggcgtgggacgcatcgtcgtg
gactcgctcgccgagatcgagctcgtggcacggctggcccgcgaccgcggcacccgcgcg
cccgtgatgatccgcgtgaccccgggggtgcacgcgtccacgcacgagttcatcgcgacc
gcccacgaggaccagaagttcggactctcgctgaacccggtgcaggagggggaggactct
cccgcactcgtggccgtggctgcatgcgttgacgcctccgatgcactggacctgcgcggg
ctgcactgccacatcggatcccagattttcgcggcggagggcttcggtcaggccgccgag
cgcgtcttcgcgctgcgcgagaccgtggccgagcgctgggacgtgacgctgcccgagatc
gacctgggtggcggccacggtgtggcgtacaccgccgcggacagtccgcgcgaggtcgcc
gcgatcgccgcggacctcgccccgttgctcgcctccgtgctcgagtcctcggacctcccc
gccccgcacctgtccttcgaaccgggccggttcatcgccggaccctccgggtgcacggtc
tacacggtgggcaccgtcaagacggtcacggtcagcccgggcgtgcagcgccggtacgtg
tccgtggacggcggcatgagcgacaacgcccgtcccgtgctctacgacgccgactacacc
gccgtgctcgccaaccgcgtgtccgaggagacgcccgtgctctcgcgcgtggtcggcaag
cactgcgagtccggtgacatcgtggtcaaggacgtctacctccccggggacgtcaccgcg
ggtgacctgctcgtggtgcccgtgactggtgcgtattgctggtccctgtccagcaactac
aactggctgccccgcccggggatcgtggcggtcgcaccggacggtgccacccgcgagatc
gtgcgccgcgagtccgtctccgacctgctcgcccgcgacaccggggtgtga
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