KEGG   Kocuria sp. KD4: HBK84_06085
Entry
HBK84_06085       CDS       T06521                                 
Symbol
nrdE
Name
(GenBank) class 1b ribonucleoside-diphosphate reductase subunit alpha
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
kod  Kocuria sp. KD4
Pathway
kod00230  Purine metabolism
kod00240  Pyrimidine metabolism
kod01100  Metabolic pathways
kod01232  Nucleotide metabolism
Module
kod_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
kod_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:kod00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    HBK84_06085 (nrdE)
   00240 Pyrimidine metabolism
    HBK84_06085 (nrdE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:kod03400]
    HBK84_06085 (nrdE)
Enzymes [BR:kod01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     HBK84_06085 (nrdE)
DNA repair and recombination proteins [BR:kod03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    HBK84_06085 (nrdE)
SSDB
Motif
Pfam: Ribonuc_red_lgC RNR_N Ribonuc_red_lgN
Other DBs
NCBI-ProteinID: QIR69673
LinkDB
Position
1326459..1328618
AA seq 719 aa
MSVEPGHEDPTCPEKYRGLGYHELNALLNLYDADGKIQFEADRQAARQYFLQHVNKNTVF
FHDLEEKLKYLVDHQYYEAEVLEKYSFEFVKALSKQAYGYKFRFQTFLGAFKFYTSYTLK
TFDGQRYLERFEDRVVMVSLYLADGNEALAQRLVAEIISGRFQPATPTFLNAGKKQRGEL
VSCFLVRFEDNMESIGRNINSALQLSKRGGGVAFALTNLRESGAPIKMIENQSSGVIPVM
KLLEDSFSYANQLGARQGAGAVYLNAHHPDILNFLDTKRENADEKIRIKTLSLGVVIPDI
TFELAKKDQDMYLFSPYDVERIYGVPFADVNVSEKYHEMVNDSRIAKKKINAREFFQTVA
EVQFESGYPYIMFEDTVNRANPIDGKIIMSNLCSEILQVSEPSVYNEDLTYAQVGKDISC
NLGSMNIAMAMESQDFGASIEIAIRGLTAVSDMSNIDSVPSIRRGNEMSHAVGLGQMNLH
GYLAKEHIHYGSTEGVDFTNMYFYAVTYHAIRASNLIAKERGESFVGFEKSAYASGTFFD
KYVDGVWEPATPRVAELFERAGIALPTANDWRELREKVMADGMYNQNLQAVPPTGSISYI
NNSTSSIHPIASRIEIRKEGKLGRVYYPAPFMDNENLEYFQDAYEIGYEKIIDTYAAATQ
HVDQGLSLTLFFKDTATTRDINRAQIYAWRKGIKTMYYSRIRQLALEGTEVEGCVSCML
NT seq 2160 nt   +upstreamnt  +downstreamnt
gtgagcgtcgaacccggtcacgaggatcccacctgccccgagaagtaccgcgggctgggc
taccacgagctcaacgcgctgttgaacctctacgacgcggacggcaagatccagttcgag
gccgaccgccaggccgcgcgacagtacttcctgcagcacgtgaacaagaacaccgtgttc
ttccacgacctcgaggagaagctcaagtacctcgtggaccaccagtactacgaggccgag
gtgctcgagaagtacagcttcgagttcgtgaaggcgctgtccaagcaggcctacggctac
aagttccggttccagaccttcctgggcgcgttcaagttctacacgtcatacacgctcaag
accttcgatggtcagcgttacctggaacggttcgaggaccgcgtggtcatggtgtccctg
tacctcgcggacgggaacgaggccctcgcgcagcggctcgtggcggagatcatctccggg
cggttccagccggccacgcccacgttcctcaacgcgggcaagaagcagcgcggcgagctc
gtctcgtgcttcctggtgcgcttcgaggacaacatggagtcgatcgggcgcaacatcaac
tccgcgctgcagctgtccaagcgcggcggtggcgtggcgttcgcgctgaccaacctgcgc
gagtccggtgcgcccatcaagatgatcgagaatcagtcctccggtgtcatccccgtgatg
aagctgctcgaggactccttctcctacgccaatcagctgggtgcccgccagggcgccggc
gcggtgtacttgaacgcccaccacccggacatcctcaacttcctggacaccaagcgcgag
aacgcggacgagaagattcgcatcaagaccctctcgctgggtgtggtcatcccggacatc
acgttcgagctggccaagaaggaccaggacatgtacctgttctccccgtacgacgtggag
aggatctacggcgtgccgttcgcggacgtcaacgtgagcgagaagtaccacgagatggtg
aacgactcccgcatcgccaagaagaagatcaacgcccgcgagttcttccagaccgtggcg
gaggtgcagttcgagtccgggtacccgtacatcatgttcgaggacacggtgaaccgcgcc
aaccccatcgacggcaagatcatcatgtccaacctgtgctccgagatcctccaggtctcc
gagccctccgtgtacaacgaggacctcacgtacgcgcaggtgggcaaggacatctcgtgc
aacctggggtccatgaacatcgccatggccatggagtcccaggacttcggcgcgagcatc
gaaatcgcgatccgcggtctcacggcggtctcggacatgtccaacatcgactcggtgccc
tccatccggcgcggcaacgagatgtcccacgcggtgggcctggggcagatgaacctgcac
gggtacctcgccaaggagcacatccactacggttcgaccgagggcgtggacttcaccaac
atgtatttctacgcggtgacctaccacgcgatccgcgcgtccaacctgatcgccaaggag
cgcggcgagtccttcgtgggcttcgagaagtcggcctacgcgagcggcacgttcttcgac
aagtacgttgacggcgtgtgggagcccgccacgccgcgcgtcgccgagctgttcgagcgg
gcgggcatcgccctgcccaccgcgaacgactggcgtgagctgcgcgagaaggtcatggcg
gacgggatgtacaaccagaacctgcaagcggtcccgcccacggggtccatctcgtacatc
aacaactccacgtcctcgatccacccgatcgcctcgcggatcgagatccgcaaggagggc
aagctcgggcgtgtgtactacccggcgccgttcatggacaacgagaacctggagtacttc
caggacgcgtacgagatcggctacgagaaaatcatcgacacgtacgccgccgcgacccag
cacgtggaccagggcctgtccctcacgctgttcttcaaggacaccgccaccacgcgcgac
atcaaccgcgcgcagatctacgcgtggcggaagggcatcaagaccatgtactactcgcgc
atccgccagctggcgctcgagggtaccgaggtcgagggctgcgtctcctgcatgttgtga

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