Kocuria sp. KD4: HBK84_06270
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Entry
HBK84_06270 CDS
T06521
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
kod
Kocuria sp. KD4
Pathway
kod03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
kod00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
HBK84_06270 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
kod03011
]
HBK84_06270 (rpsA)
Ribosome [BR:
kod03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
HBK84_06270 (rpsA)
Bacteria
HBK84_06270 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
Spt6_S1
S1_2
RNase_II_C_S1
DUF4407
SR-25
Motif
Other DBs
NCBI-ProteinID:
QIR69700
UniProt:
A0A6G9V454
LinkDB
All DBs
Position
1366977..1368446
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AA seq
489 aa
AA seq
DB search
MTTTTQQVAVNDIGTEEDFLAAVDATIKYFNDGDLVEGTVVKVDRDEVLLDIGYKTEGVI
PSRELSIKHDINPDDVVAVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGDIEKVKDED
GVVTGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLAPYIGQQLEAKIIELDKNRNNV
VLSRRAWLEQTQSEVRANFLQQLQKGQVRTGTVSSIVNFGAFVDLGGVDGLVHVSELSWK
HIDHPSEVVEVGQEVTVEVLDVDMDRERVSLSLKATQEDPWQLFARTHALGQVVPGKVTK
LVPFGAFVRVEDGIEGLVHISELAQRHVDMAEQVVSVNEELFVKVIDIDLDRRRISLSLK
QANEGVDPDSTEFDPAQYGMAAEYDEQGNYKYPEGFDPETNEWIEGYEEQRAAWEEQYAQ
AQARWEAHKEQVRKHLQEDQDAATTSSSSSSPSHSSGPTSYSSEAPAEDAGTLASDEALA
ALREKLTGH
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccaccacccagcaggtcgccgtcaacgacatcggaactgaagaggatttcctc
gccgctgtcgacgcgaccatcaagtacttcaacgacggcgacctcgtggaaggcaccgtc
gtcaaggtcgaccgcgacgaggtcctcctggacatcgggtacaagaccgaaggtgtcatc
ccctctcgtgagttgtccatcaagcacgacatcaaccccgatgacgtcgtggctgtgggt
gacgaggtggaggctctggtcctcaccaaggaggacaaggaaggtcgcctgatcctctcc
aagaagcgcgctcagtacgagcgcgcctggggcgatatcgagaaggtcaaggacgaggac
ggcgtcgtcaccggcaccgtcatcgaggtcgtcaagggcggcctcatcctggacatcggc
ctgcgtggcttcctgcccgcctccctcgtggagatgcgccgcgtccgcgacctcgctccg
tacatcggtcagcagctcgaggccaagatcatcgagctggacaagaaccgcaacaacgtg
gtgctctcccgccgtgcatggctcgagcagacccagtccgaggtgcgcgccaacttcctg
cagcagctgcagaagggccaggtccgcacgggcaccgtgtcctcgatcgtcaacttcggt
gcgttcgtggacctcggcggtgttgacggtctggtgcacgtctccgagctgtcctggaag
cacatcgaccacccctccgaggtcgtcgaggtcggtcaggaagtcaccgtcgaggtgctg
gacgtggacatggatcgcgagcgtgtgtcgctctcgctcaaggccacccaggaagatccg
tggcagctgttcgcccgcacccacgctctgggtcaggtcgtccccggcaaggtcaccaag
ctggttcccttcggtgcgttcgttcgcgtcgaggacggcatcgagggcctcgtgcacatc
tccgagctggcgcagcgtcacgtggacatggccgagcaggtcgtctccgtgaacgaggag
ctgttcgtcaaggtcatcgacatcgacttggaccgccgccggatctcgttgtccctcaag
caggccaacgagggtgtggacccggactccaccgagttcgatcccgcccagtacggcatg
gccgccgagtacgacgagcagggcaactacaagtaccccgagggcttcgatcccgagacc
aacgagtggatcgagggttacgaggaacagcgcgccgcgtgggaggagcagtacgctcag
gcccaggcccgctgggaggctcacaaggagcaggtgcgcaagcacctgcaggaagaccag
gatgcggcgaccacctcgtcctcctcgtcctccccgagccactcctccggccccacgagc
tactcctccgaggctccggccgaggacgccgggacgctcgcgtccgacgaggccctcgcc
gctctgcgcgagaagctcaccggtcactga
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