Kocuria sp. KD4: HBK84_06825
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Entry
HBK84_06825 CDS
T06521
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
kod
Kocuria sp. KD4
Pathway
kod03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kod00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HBK84_06825 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kod03400
]
HBK84_06825 (recO)
DNA repair and recombination proteins [BR:
kod03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HBK84_06825 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
HBK84_06825 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
DUF7573
DUF6656
Motif
Other DBs
NCBI-ProteinID:
QIR69794
LinkDB
All DBs
Position
complement(1511190..1511948)
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AA seq
252 aa
AA seq
DB search
MARSTFASRSYRDDAVVLRTYDLGEADRIVILLTAENGQVRAVAKGVRRTKSRFGARLEP
FHVAQVQLVHGRNLDIVSQAIGKRAYGQSIVADYEKYTAAAAMVETAEKLTADDYDTAVQ
HYQLLVGALSALARGLHEPGRILDSYLLRAVALAGWTPSFVDCARCGAPGPHRSFSAALG
GAVCPQCRPPGSAAPSAATFVLLDGLLRGDWSTIDAADTKTARAAAGFVAAYIQWHMERT
VRSLALVDRGDG
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atggcccgttcaaccttcgcatcgcgtagctatcgggacgacgccgtggtgctgcgcacc
tacgacctcggtgaagcggaccggatcgtgatcctgctgacggccgagaacggccaggtc
cgggcggtggccaagggggtgcggcgcaccaagtcgcggttcggtgcgcgcctggaaccc
ttccacgtggcccaggtgcagctcgtgcacggacggaacctggacatcgtgtcgcaggcc
atcggcaaacgggcatacgggcagagcatcgtggccgactacgaaaaatacaccgccgcg
gcggccatggtcgagaccgcggagaaactcaccgcggacgactacgacaccgcagtccag
cactaccagttgctcgtgggagcgctgtccgccctcgcgcgtggtctgcacgaaccgggg
cgcatcctggactcttacctgctacgcgccgtggccctggccggttggacgcccagtttc
gtggactgcgcacggtgcggggctcccgggccccatcgctcgttctccgcggccctcggc
ggtgcggtgtgtcctcagtgccgtccgccgggatccgccgcgcccagtgcggccacgttc
gtgctgctggacgggctgctgcgcggggactggtccacgatcgacgccgccgacaccaag
accgcgcgcgcagctgccgggttcgtggcggcgtacatccaatggcacatggagcgcacg
gtgcgttccctggccctcgtggatcgaggggacggctga
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