Kocuria sp. KD4: HBK84_07265
Help
Entry
HBK84_07265 CDS
T06521
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
kod
Kocuria sp. KD4
Brite
KEGG Orthology (KO) [BR:
kod00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
kod03051
]
HBK84_07265 (pafA)
Enzymes [BR:
kod01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
HBK84_07265 (pafA)
Proteasome [BR:
kod03051
]
Prokaryotic proteasome
Bacterial regulatory particles
HBK84_07265 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
HTH_3
Motif
Other DBs
NCBI-ProteinID:
QIR69869
LinkDB
All DBs
Position
complement(1614771..1616180)
Genome browser
AA seq
469 aa
AA seq
DB search
MERRIYGIETEFGLIHSAPQGRPLGADETARRLFAPVLAWGRASNVFLPNGGRLYLDVGS
HPEYATAEAATLHDVVAQDAAGERIVDDLRAQLQESLDAEGVGGTVHLFKNNADSAGNSF
GSHENYMIARRTEFSRLVQHLLPLLVTRQILVGAGRVHPDGPPPFGSLALGDGRPGYSFS
QRADHVWEGSSSATTRSRPMINTRDEPHADAERYRRLHVITGDSSMSQTTTALKIGITDA
VLRMIEAGQILPDRTLADPAAALRQVSHDLTGLAPLELAAGGYRSAIELQREYLEEVTRF
VQRHGAHHDRLDWVVGLWDRGLRAVEEQDSSLVDRELDWAIKKKLLDSYASAHGMDWSHP
RMAQLDLAYHDTSVRHGLFHMLERRGAVETFVAPQDVERAVVEGPPTRARMRGRFVAAAH
DAGVSTTVDWVHLKLNGEHQQSTVMCKDPFATTQPDVEELIAEITSGRA
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
gtggaacggcggatctacgggatcgagaccgagttcggcctgatccacagcgcaccgcag
ggccgtcccctgggtgcggacgagacggcgcggcggctgttcgcaccggtgctcgcgtgg
gggcgggcctccaacgtgttcctgcctaacggcgggcgcctgtacctggacgtgggctcc
caccccgagtacgcgacggccgaggccgcaaccctgcacgacgtcgtcgcccaggacgcc
gccggcgaacggatcgtggacgacctgcgcgctcagctgcaggagagcctggacgccgag
ggcgtgggcggcacggtgcacctgttcaagaacaacgcggactccgccggcaactcgttc
ggctcgcacgagaactacatgattgcccgccgcacggagttctcccggctggtccagcac
ctgctgccgctactggtgacgcggcagatcctcgtgggcgcgggtcgggtgcacccggac
gggccgccgcccttcggctccctggccctgggggacgggcgccccggctactcgttctcc
cagcgggcggaccacgtgtgggaggggtcgtcctcggccaccacccgctcccgccccatg
atcaacacccgggacgaaccgcacgcggacgccgagcgctaccgccggctgcacgtcatc
acgggcgactcgtccatgtcccagaccaccacggcgctgaagatcggcatcacggacgcg
gtgctgcgcatgatcgaggcgggccagatcctgccggaccgcacgctcgcggacccggct
gccgccctgcggcaggtctcccacgacctcaccggtttggcaccgctggagctggccgcg
gggggctaccgctcggcgatcgaactgcagcgcgagtaccttgaggaagtcacccggttc
gtgcagcgccacggcgcgcaccacgaccgcctcgactgggtcgtcgggctgtgggaccgt
gggctgcgcgccgtcgaggagcaggacagctcgctggtggaccgcgagctggactgggcc
atcaagaagaagctgctggactcctacgcgagcgcccacgggatggactggtcccacccc
cgcatggcgcagttggacctcgcttaccacgacacctccgtgcgccacggacttttccat
atgctggagcgccgcggtgccgtggagacgttcgtggccccgcaggacgtcgagcgcgcc
gtcgtcgaaggccctcccacccgggcgcggatgcgcgggcggttcgtggccgcggcccac
gacgccggggtcagcaccaccgtggactgggtgcacctgaagctcaacggggagcaccag
cagagcacggtcatgtgcaaggaccccttcgccaccacccagccggacgtcgaggagctg
atcgcagagatcacctccggacgcgcctga
DBGET
integrated database retrieval system
