Kocuria sp. KD4: HBK84_07530
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Entry
HBK84_07530 CDS
T06521
Name
(GenBank) DNA topoisomerase 4 subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
kod
Kocuria sp. KD4
Brite
KEGG Orthology (KO) [BR:
kod00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kod03032
]
HBK84_07530
03400 DNA repair and recombination proteins [BR:
kod03400
]
HBK84_07530
Enzymes [BR:
kod01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HBK84_07530
DNA replication proteins [BR:
kod03032
]
Prokaryotic type
DNA Topoisomerases
HBK84_07530
DNA repair and recombination proteins [BR:
kod03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HBK84_07530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
QIR69913
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Position
1679792..1682332
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AA seq
846 aa
AA seq
DB search
MARRRSAMRSPQDELPKDFTEHIVDVDVTQEMETSFLEYSYSVIYSRALPDARDGLKPVQ
RRILFMMDQMGLRPDRGHVKSARVVGEVMGKLHPHGDAAIYDAMVRMAQSFAMRVPLVDG
HGNFGSLDDGPAAPRYTEARMAPAARTLTGDLDEDVVDFVPNYDNQFQQPAVLPAAYPNL
LVNGATGIAVGMATNMAPHNMREVAAGARHLILNPEATLEELMRFIPGPDLPSGGRIVGL
EGVRDAYRTGRGSFRTRATVSVEQVSPRKQGIVVTELPYMVGPEKVTEKIKDAVQAKKLA
GISDVVDLTDRTNGLRLVIELKNGFNPQAVLAQLYKHTPLEESFGINNVALVEGQPRTMG
LLELLRVYSDHRISVVRRRTAFRLAKRQNRLHLVEGLLIAILDIDEVIQIIRSSEETAEA
RDRLIAVFDLSRAQSEHILELRLRQLTKFSRIELEAERDTLQREIAELEAILGSETALRG
VVADELTETAEKFGDERRTVLLEAEDLPAVTAENARGKKNAAPSVALEISDDPCWVFLST
TGRIARSAVRTPLADGSRRFKHDALTSVVPSTARGEIAAITSTGRMLRVSCVDVPVLQEF
DGVPRLADGVPAADFLGLDKNETLVGLVPSNAVFAIGTADGVVKRVNPDYPLNLDQWPAI
KLKDGDSVVGVGAAPVDAELVLVSSDAKLLHFPASAVRPQGRTAGGVAGMKLAADEHVIF
FGAVAPSESTVVVTQARSDGQLPEMGEASVKVTPLSEFPAKGRATAGVRAQRLLAGETGL
TLAWVGHGPGKAVSAAGVARSLPVEYGRRDGSGVGIDRAVAAVGPALRGLPVPGTTTNGE
SAAEDE
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atggctcgtcgccgctcagccatgcgttctccccaggacgaattgcccaaggacttcacc
gagcacatcgtggacgtggacgtcacgcaggagatggagacgagctttctggagtactcc
tactccgtgatctactcccgcgcgctgccggacgcccgggacggtctcaagcccgtgcag
cggcggatcctgttcatgatggaccagatgggcctgcgcccggaccgcggccacgtcaag
agtgcgcgcgtggtgggcgaggtcatgggcaagctgcacccccacggtgacgccgcgatc
tacgacgccatggtccgcatggcgcagtccttcgcgatgcgcgtgccactcgtggacggg
cacggcaacttcgggtcgctcgacgacggtccggcggccccgcgctacacggaggcccgg
atggccccggccgcgcgcacgctcacgggtgacctcgacgaggacgtcgtggacttcgtg
cccaactacgacaaccagttccagcagcccgcggtgctgccggccgcgtaccccaacctg
ctcgtcaacggggccaccgggattgcggtgggcatggccacgaacatggcaccgcacaac
atgcgcgaggtcgcggccggggcccggcacctcatcctgaaccccgaggccacgctcgag
gaactcatgcggttcatccccggtccggacctgccctccggcggtcggatcgtgggcctc
gagggcgtgcgggacgcctaccgcaccgggcggggttcgttccgcacgcgcgccacggtc
tccgtggaacaggtctcgccccgcaagcagggcatcgtggtgaccgagctgccgtacatg
gtgggccccgagaaggtcaccgagaagatcaaggacgcggtccaggccaagaagctcgcc
gggatctcggacgtcgtggacctcaccgaccgcaccaacgggctgcgcctggtcatcgag
ctcaagaacggtttcaacccgcaggccgtgctcgcgcagctgtacaagcacacaccgctc
gaggagtccttcgggatcaacaacgtggctctcgtggagggtcagccccgcaccatgggg
ctgctcgagctgttgcgggtctacagcgaccaccggatcagtgtggtgcgccggcgcacc
gcgttccgcctggccaagcggcagaaccggttgcacctcgtggaggggttgctgatcgcg
atcctcgacatcgacgaggtcatccagatcatccgttcctccgaggagacggccgaggcc
cgggaccggttgatcgcggtcttcgacctctcccgcgcgcagtccgagcacatcctggaa
ctgcggttgcgtcagctgaccaagttctcccggatcgagctcgaggccgagcgggacacc
ctgcagcgggagatcgccgaactcgaggcaatcctgggctcggagaccgcgctgcgcggc
gtggtcgcggacgagctcaccgagaccgcggagaagttcggtgacgagcggcgcaccgtg
ctgctcgaggccgaggacctgcccgcggtcaccgcggagaacgcgcgcgggaagaagaac
gcggcaccgtccgtggcgctcgagatcagcgacgacccgtgctgggtgttcctgtccacg
accgggcggatcgcccgcagtgccgtgcgcaccccgctcgctgacggctcgcggcgcttc
aagcacgacgccctgacgagcgtggtgccctcgacggcgcgcggggagatcgccgcgatc
acgtccacgggccggatgctgcgcgtctcgtgcgtggacgtgcccgtgctgcaggagttc
gacggcgttccccgcctcgcggacggcgtgcccgccgcggacttcctgggtctggacaag
aacgagacgctcgtgggactcgtgcccagcaatgccgtgttcgcgattgggaccgcggac
ggcgtggtcaaacgcgtgaaccccgactacccgctgaacctggaccagtggcccgcgatc
aagctcaaggacggggactcggtggtgggtgtgggtgccgcgccggtcgacgcggaactc
gtgttggtctcctcggacgccaagctgctgcacttccccgcatccgcggtgcgcccccag
ggccgaacggccggtggcgtggccgggatgaaactcgcggcggacgagcacgtgatcttc
ttcggggcggtggcaccgagcgagtccaccgtggtggtcacccaggcccgcagtgacggt
cagctgcccgagatgggcgaggcgtccgtgaaggtcaccccgctctcggaattccccgcc
aagggccgcgcgaccgccggtgtgcgggcccagcgactactcgcgggtgagaccgggttg
accctggcgtgggtcggccacgggccgggcaaggccgtgtccgcggcgggcgtcgcgcga
tcgctccccgtggagtatgggcgccgggacggttccggtgtgggcatcgaccgtgcggtc
gcagccgtgggacccgcgctcagaggtctccccgtgccggggaccacgacgaatggggag
tcagccgcggaggacgaatga
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