Kocuria sp. KD4: HBK84_07535
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Entry
HBK84_07535 CDS
T06521
Name
(GenBank) type IIA DNA topoisomerase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
kod
Kocuria sp. KD4
Brite
KEGG Orthology (KO) [BR:
kod00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kod03032
]
HBK84_07535
03400 DNA repair and recombination proteins [BR:
kod03400
]
HBK84_07535
Enzymes [BR:
kod01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HBK84_07535
DNA replication proteins [BR:
kod03032
]
Prokaryotic type
DNA Topoisomerases
HBK84_07535
DNA repair and recombination proteins [BR:
kod03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HBK84_07535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
Motif
Other DBs
NCBI-ProteinID:
QIR69914
LinkDB
All DBs
Position
complement(1682496..1684604)
Genome browser
AA seq
702 aa
AA seq
DB search
MTPSRSEYNARHLSVLEGLEAVRKRPGMYIGSTDSRGLMHCLWEIIDNSVDEALAGYGQD
ITVILHRDGCVEVHDDGRGIPIDTEPRTGLTGVEVVFTKLHAGGKFGGGSYTASGGLHGV
GASVVNALSARLDVQVDRGGKTYQMSFKRGEPGTFTDKGAPSPSAPFEAFTTDSHLQVVG
RAKRGVTGTRIRYWADDQIFTPDARFSTEELVRRARQTAFLIPGLKITVQDERRLPGTPG
ADGPVEEVFQYDGGISEFAEFLAADAPVTDVWRLQGQGSFTERVPVLDESGHARLTDVDR
TCEVDVALRWGVGYDSTVRSFVNIIATPKGGTHLSGFENALLKTLRKQVETNSRKLKAGN
DKLEKDDVLAGLTAVLTVRLAEPQFEGQTKEVLGTPAVRQIVAKVVEAELTKQLTSKKRD
DRAQAGQLLEKVVAEMKSRISARVHKETQRRKNALETSSMPTKLVECRSADVDRSELFIV
EGDSALGTARLARNSNYQALLPIRGKILNVQKASITDMLANAECAALIQVIGAGSGRSFD
LDAARYGKVIMMTDADVDGAHIRTLLLTLFYRYMRPLVEAGRVYAAVPPLHRVQIVNPGS
KPNEMVYTYSERELDTLLGSLEEQDRRYKEPIQRYKGLGEMDADQLAETTMDIRHRVLRR
VRVSDAEAAERAFSLLMGSQVAPRKDFIVAGAAQLNQEQIDA
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
gtgacaccgtcccgttccgaatacaacgcccgccacctctccgtcctggagggcctcgag
gcggtacgcaaacgcccgggcatgtacatcggctccacggactcgcgcggtctgatgcac
tgcctgtgggagatcatcgacaactccgtcgacgaggcgctcgcggggtacggccaggac
atcacggtgatcctgcaccgggacgggtgcgtggaggtccacgacgacggtcgcggcatc
cccatcgacaccgaaccccgcacgggcctcacgggcgtggaggtcgtgttcaccaaactg
cacgccggcggcaagttcggcggcggttcgtacacggcgtcgggcgggctgcacggcgtg
ggtgcctcggtggtcaatgcgctgtccgcgcgcctggacgtgcaggtggaccgtggcggc
aagacctaccagatgtcgttcaaacgcggtgagcccgggacgttcacggacaagggggcg
ccgtccccgagtgcaccgttcgaggcgttcacgaccgactcgcacctgcaggtcgtgggc
agagccaagcgcggcgtcaccggcacacggatccgctactgggccgacgatcagatcttc
accccggacgcgcgcttctccaccgaggagctcgtgcgccgcgcccgccagaccgcgttc
ctgatccccgggctgaagatcaccgtgcaggacgaacgccgcctgccgggtacaccgggc
gcggacggtcccgtggaggaggtcttccagtacgacggcgggatctcggagttcgcggag
ttcctcgccgcggacgcgcccgtcaccgacgtgtggcggctgcaggggcagggcagtttc
accgagcgggtccctgtgctcgacgagtccggacacgcccggctcaccgacgtcgatcgc
acgtgcgaggtggacgtggccctgcgctggggcgtggggtacgacagcacggtgcgctcg
ttcgtcaacatcatcgccacgcccaagggtggcacccacttgagcggtttcgaaaatgcg
ctgctcaagaccctgcgcaagcaggtggagaccaactcccgcaagctcaaggcgggtaac
gacaagctcgagaaggacgacgtcctggccgggctcaccgcggtactcacggtccggttg
gccgaaccccagttcgaggggcagaccaaggaggtgctgggcacccctgcggtgcgccag
atcgtcgctaaggtcgtggaggcggagctcaccaagcagctgacttccaagaagcgggac
gacagggcccaggccggtcagctgctcgagaaggtcgtcgcggagatgaagtcccggatc
tcggcccgagtgcacaaggagacccagcggcgcaagaacgcgctcgagacgtcgtcgatg
cccacgaaactcgtggagtgccgttccgcggacgtggaccgctcggagctgttcatcgtg
gagggcgactctgcgctcggcaccgcccggctcgcccgcaactccaactaccaggcgctg
ttgccgatccgcggcaagatcctgaacgtgcagaaggcctcgatcacggacatgctcgcg
aacgccgagtgcgcggccctgatccaggtaatcggggccgggtcgggtcgcagcttcgac
ctggacgccgcccgctacggcaaggtcatcatgatgacggacgcggacgtggacggcgcc
cacatccgcaccctgttgctcacgctcttctaccgttacatgcgcccgctcgtggaggcc
ggacgggtctacgccgcggtgcccccgctgcaccgggtgcagatcgtcaacccgggctcc
aagcccaacgagatggtctacacgtattcggagcgcgaactcgacacgctgctgggcagc
ctcgaagagcaggatcgtcggtacaaggagcccatccagcgctacaagggcctgggggag
atggacgccgatcagctcgcggagaccacgatggacatccgccaccgtgtcctgcggcgc
gtgcgcgtgtccgacgccgaggccgccgagcgcgcgttctccctgctcatgggctcgcag
gtggccccgcgcaaggacttcatcgtagccggtgccgcccagctcaaccaggagcagatc
gacgcctga
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