Kocuria sp. KD4: HBK84_07550
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Entry
HBK84_07550 CDS
T06521
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
kod
Kocuria sp. KD4
Pathway
kod02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
kod00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
HBK84_07550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kod03021
]
HBK84_07550
Transcription machinery [BR:
kod03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HBK84_07550
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HC2
CDC27
Motif
Other DBs
NCBI-ProteinID:
QIR69916
UniProt:
A0A6G9V3R5
LinkDB
All DBs
Position
complement(1685876..1687537)
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AA seq
553 aa
AA seq
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MRCAPVDLSNERFSVSPAASKTASASQASTAQTDPAETTSQAGTGGASTSGAAKKPAVKR
AAAAKKTVARKSTAAKKSASATRGTAAASSQTTAATSDAAASNETDTAAPAAKKTATRKT
AAKKTAATKNAATKSTTRTKTTADSAEGTAKSTGTRKTTKTAAKPAAKAPAGGRGRKKAD
PVEEALAEDELVPEDTPEDLEDEDTQESQQASVEESAPLMKGRQDKSARGFVLTNNDDDD
APAQQVVVAGATADPVKDYLKQIGKVALLNAEQEVDLALRIEAGLYAEHKFADEQDSMDA
DTRRAYRWVIHDGRRAKNHLLEANLRLVVSLAKRYTGRGMLFLDLIQEGNLGLIRAVEKF
DYTKGFKFSTYATWWIRQAITRAMADQARTIRIPVHMVEVINKLARVQRQMLQDLGREPT
PEELANELDMTPEKVVEVQKYGREPISLHTPLGEDGDSEFGDLIEDSEAVVPADAVSFTL
LQEQLHSVLDTLSEREAGVVAMRFGLTDGQPKTLDEIGKVYGVTRERIRQIESKTMSKLR
HPSRSQVLRDYLD
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgcggtgcgcacccgtagatctgtccaacgaaaggttctccgtgtcaccagctgccagc
aagaccgcgtccgcttctcaggcctccacggcgcagacggaccccgctgagaccacttct
caggcaggcacgggcggcgctagcacgagtggcgctgctaagaagcccgccgtgaagcgg
gccgccgcggccaagaagactgtggcgcgcaagagcaccgccgctaagaagagcgcttcc
gccacgcgggggaccgccgcggcgtcgtcgcagaccaccgctgccacatcggacgcggcg
gcgtcgaacgagacagacaccgccgcgcccgcggcgaagaagaccgccacccggaagacc
gccgccaagaagacggccgcgaccaagaacgcggcgaccaagtccacgacccgcaccaag
accaccgcggactccgcggagggcaccgccaagtccacgggcacccgcaagaccaccaaa
accgccgcgaagcccgccgccaaggcccccgcgggcggacgcggtcggaagaaggcggat
cccgtcgaggaggcgctcgccgaggacgaattggtgcccgaggacaccccggaggacctc
gaggacgaggacacccaggagtcccagcaggcctcagtggaggaatcggccccgctcatg
aagggccgccaggacaagagtgcgcgcggcttcgtgctgaccaacaacgacgacgacgac
gctcccgcccagcaggtggtcgtcgccggtgccaccgcggaccccgtcaaggactacctc
aagcagatcggaaaggtcgcgctgctcaacgcggaacaggaggtggacctggccctgcgc
atcgaggccgggctgtacgccgagcacaagttcgcggacgaacaggactccatggacgcg
gacacccgccgcgcctaccgctgggtgatccacgacggccgccgcgccaagaaccacctg
ctcgaggccaacctgcgcctcgtggtgtctctggccaagcgctacacgggccgcggcatg
ctgttcctggacctgattcaggagggcaacctgggcctgatccgcgcggtcgagaagttc
gactacaccaagggcttcaagttctccacgtacgccacgtggtggatccgccaagccatc
acccgcgccatggcggaccaggcccgcaccatccgcatcccggtgcacatggtcgaggtc
atcaacaagctggcccgcgtgcagcgccagatgctgcaggacctggggcgcgaacccacc
ccggaggagctcgccaacgagctcgacatgacccccgagaaggtcgtggaggtccagaag
tacggtcgcgaacccatttcgttgcacacgccgctcggtgaggacggtgactccgagttc
ggcgacctgatcgaggactccgaggccgtggtccccgcggacgccgtgtccttcacgctg
ctgcaggagcagttgcactcggtgctggacacgctctccgaacgcgaggccggtgtggtg
gccatgcgcttcgggctcacggacggtcagcccaagacccttgacgaaatcgggaaggtc
tacggggtcacccgtgagcggattcgccagatagagtccaagaccatgtccaagctgcgt
cacccgtcccgctcgcaggtgctgcgggactacctggactga
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