KEGG   Kocuria sp. KD4: HBK84_07550
Entry
HBK84_07550       CDS       T06521                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K03086  RNA polymerase primary sigma factor
Organism
kod  Kocuria sp. KD4
Pathway
kod02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:kod00001]
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    HBK84_07550
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:kod03021]
    HBK84_07550
Transcription machinery [BR:kod03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     HBK84_07550
SSDB
Motif
Pfam: Sigma70_r3 Sigma70_r2 Sigma70_r4 Sigma70_r1_2 HC2 CDC27
Other DBs
NCBI-ProteinID: QIR69916
UniProt: A0A6G9V3R5
LinkDB
Position
complement(1685876..1687537)
AA seq 553 aa
MRCAPVDLSNERFSVSPAASKTASASQASTAQTDPAETTSQAGTGGASTSGAAKKPAVKR
AAAAKKTVARKSTAAKKSASATRGTAAASSQTTAATSDAAASNETDTAAPAAKKTATRKT
AAKKTAATKNAATKSTTRTKTTADSAEGTAKSTGTRKTTKTAAKPAAKAPAGGRGRKKAD
PVEEALAEDELVPEDTPEDLEDEDTQESQQASVEESAPLMKGRQDKSARGFVLTNNDDDD
APAQQVVVAGATADPVKDYLKQIGKVALLNAEQEVDLALRIEAGLYAEHKFADEQDSMDA
DTRRAYRWVIHDGRRAKNHLLEANLRLVVSLAKRYTGRGMLFLDLIQEGNLGLIRAVEKF
DYTKGFKFSTYATWWIRQAITRAMADQARTIRIPVHMVEVINKLARVQRQMLQDLGREPT
PEELANELDMTPEKVVEVQKYGREPISLHTPLGEDGDSEFGDLIEDSEAVVPADAVSFTL
LQEQLHSVLDTLSEREAGVVAMRFGLTDGQPKTLDEIGKVYGVTRERIRQIESKTMSKLR
HPSRSQVLRDYLD
NT seq 1662 nt   +upstreamnt  +downstreamnt
atgcggtgcgcacccgtagatctgtccaacgaaaggttctccgtgtcaccagctgccagc
aagaccgcgtccgcttctcaggcctccacggcgcagacggaccccgctgagaccacttct
caggcaggcacgggcggcgctagcacgagtggcgctgctaagaagcccgccgtgaagcgg
gccgccgcggccaagaagactgtggcgcgcaagagcaccgccgctaagaagagcgcttcc
gccacgcgggggaccgccgcggcgtcgtcgcagaccaccgctgccacatcggacgcggcg
gcgtcgaacgagacagacaccgccgcgcccgcggcgaagaagaccgccacccggaagacc
gccgccaagaagacggccgcgaccaagaacgcggcgaccaagtccacgacccgcaccaag
accaccgcggactccgcggagggcaccgccaagtccacgggcacccgcaagaccaccaaa
accgccgcgaagcccgccgccaaggcccccgcgggcggacgcggtcggaagaaggcggat
cccgtcgaggaggcgctcgccgaggacgaattggtgcccgaggacaccccggaggacctc
gaggacgaggacacccaggagtcccagcaggcctcagtggaggaatcggccccgctcatg
aagggccgccaggacaagagtgcgcgcggcttcgtgctgaccaacaacgacgacgacgac
gctcccgcccagcaggtggtcgtcgccggtgccaccgcggaccccgtcaaggactacctc
aagcagatcggaaaggtcgcgctgctcaacgcggaacaggaggtggacctggccctgcgc
atcgaggccgggctgtacgccgagcacaagttcgcggacgaacaggactccatggacgcg
gacacccgccgcgcctaccgctgggtgatccacgacggccgccgcgccaagaaccacctg
ctcgaggccaacctgcgcctcgtggtgtctctggccaagcgctacacgggccgcggcatg
ctgttcctggacctgattcaggagggcaacctgggcctgatccgcgcggtcgagaagttc
gactacaccaagggcttcaagttctccacgtacgccacgtggtggatccgccaagccatc
acccgcgccatggcggaccaggcccgcaccatccgcatcccggtgcacatggtcgaggtc
atcaacaagctggcccgcgtgcagcgccagatgctgcaggacctggggcgcgaacccacc
ccggaggagctcgccaacgagctcgacatgacccccgagaaggtcgtggaggtccagaag
tacggtcgcgaacccatttcgttgcacacgccgctcggtgaggacggtgactccgagttc
ggcgacctgatcgaggactccgaggccgtggtccccgcggacgccgtgtccttcacgctg
ctgcaggagcagttgcactcggtgctggacacgctctccgaacgcgaggccggtgtggtg
gccatgcgcttcgggctcacggacggtcagcccaagacccttgacgaaatcgggaaggtc
tacggggtcacccgtgagcggattcgccagatagagtccaagaccatgtccaagctgcgt
cacccgtcccgctcgcaggtgctgcgggactacctggactga

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