Kocuria sp. KD4: HBK84_08280
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Entry
HBK84_08280 CDS
T06521
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
kod
Kocuria sp. KD4
Pathway
kod00061
Fatty acid biosynthesis
kod00071
Fatty acid degradation
kod01100
Metabolic pathways
kod01212
Fatty acid metabolism
kod02024
Quorum sensing
kod04146
Peroxisome
Module
kod_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
kod00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
HBK84_08280
00071 Fatty acid degradation
HBK84_08280
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
HBK84_08280
09145 Cellular community - prokaryotes
02024 Quorum sensing
HBK84_08280
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
kod01004
]
HBK84_08280
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
kod04147
]
HBK84_08280
Enzymes [BR:
kod01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
HBK84_08280
Lipid biosynthesis proteins [BR:
kod01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
HBK84_08280
Exosome [BR:
kod04147
]
Exosomal proteins
Exosomal proteins of breast milk
HBK84_08280
Exosomal proteins of breast cancer cells
HBK84_08280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
PilZ
Motif
Other DBs
NCBI-ProteinID:
QIR70036
LinkDB
All DBs
Position
complement(1848771..1850285)
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AA seq
504 aa
AA seq
DB search
MTNLATLLTTSAAQYTSDPAIILDELHMTYGQLDDLSARGAALLKANGIRPGDRVALVLP
NVPHMAVLYYAILRAGGIVVPLNPLLTPRELTYHFQDSGCSFVLAWEDMAQASQKAAEEI
EGLNVLPISARGTVERLQGVDPDRDVVERQDSDTAVLLYTSGTTGRPKGAELTHHNLLTN
AEVAGEVFNLHHGDVMFGGLPFFHVFGQTVALNGVICSGAAVTLLPRFHPGKALEILRRD
GVTIFAGVPTMYVALLHQANQDPQAVEGVDLRAGVSGGSPMPVEVMVKFEKVFNTTVFEG
YGLSETSPVVCFNQPGNERKPGSIGTAVRGAELRVVDGDDQQVPTNEVGELVVRGQYVMK
GYWNKPEATENAMRGGWFHTGDMAREDEDGAFFIVDRKKDMILRGGYNVYPREVEEAIYQ
FPGVVEAAVLGVPSEKHGEEVGAVVVFESGVLESKGREALTQELDAFVQERVAKYKYPRI
YRVTDELPKGPTGKILKRELTLDA
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgaccaacctggctaccctgctcaccacctcggccgcccagtacacgtccgatcccgcg
atcattctcgacgagctgcacatgacctacgggcagctggacgatctctccgcccgcggc
gcggcgctgctcaaggccaacggcatccgaccgggggaccgcgtggccctcgtgctgccc
aacgtgccccacatggccgtgctgtactacgcgatcctgcgcgccggcggcatcgtagtc
cccctcaaccccctgctcacgccccgagagctcacctaccacttccaggactctgggtgc
tccttcgtgctcgcgtgggaggacatggcgcaggccagccagaaggcggccgaggagatc
gagggcctcaatgtgctgcccatcagcgcccgcggaacggtggagcgcctccagggtgtg
gatcccgaccgtgacgtcgtggagcgtcaggactcggacacggccgtgctgctctacacg
tccgggaccaccggccgccccaagggggcggagctgacccaccacaacctgctcaccaac
gccgaggtcgccggcgaggtgttcaacctgcaccacggggacgtgatgttcggtgggctg
cccttcttccacgtgttcggccagacggtggcgctcaacggcgtgatctgcagcggtgcg
gccgtgactctgctgccccgcttccacccgggcaaggccctggagatcctgcgccgcgac
ggtgtcacgatcttcgcgggggtccccaccatgtacgtggccctgctgcaccaggccaac
caggacccgcaggccgtcgagggcgtggacctgcgtgccggcgtgtccggagggtccccc
atgcccgtggaggtcatggtcaagttcgagaaggtcttcaacaccaccgtgttcgagggg
tacgggctgtccgagacctcgccggtggtgtgcttcaaccagccgggcaacgagcgcaag
ccgggctccatcggcacggccgtgcgcggtgcggagctgcgcgtggtggacggggacgac
cagcaggtccccaccaacgaggtcggtgagctcgtggtgcgcgggcagtacgtgatgaag
ggctactggaacaagcccgaagccaccgagaacgcgatgcgcggcggctggttccacacc
ggtgacatggcccgcgaggacgaggacggcgcgttcttcatcgtggaccgtaagaaggac
atgatcctgcgcggcggttacaacgtgtacccgcgcgaggtcgaggaggccatctaccag
ttccccggcgtggtggaggccgcggtgctgggggtcccgagcgagaagcacggcgaggag
gtcggggccgtggtggtcttcgagtccggggtgctcgagtccaagggccgcgaggcgctc
acgcaagagctggacgcgttcgtgcaggaacgggtggccaagtacaagtacccccgcatc
taccgcgtcacggacgagctgcccaaaggcccgacgggcaagatcctcaagcgcgaactg
accctcgatgcataa
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