Kocuria sp. KD4: HBK84_08330
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Entry
HBK84_08330 CDS
T06521
Name
(GenBank) phenylalanine--tRNA ligase subunit beta
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
kod
Kocuria sp. KD4
Pathway
kod00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
kod00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HBK84_08330
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
kod01007
]
HBK84_08330
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kod03016
]
HBK84_08330
Enzymes [BR:
kod01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
HBK84_08330
Amino acid related enzymes [BR:
kod01007
]
Aminoacyl-tRNA synthetase
Class II (U)
HBK84_08330
Transfer RNA biogenesis [BR:
kod03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
HBK84_08330
Prokaryotic type
HBK84_08330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
B5
tRNA_bind
Motif
Other DBs
NCBI-ProteinID:
QIR70046
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All DBs
Position
complement(1858939..1861491)
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AA seq
850 aa
AA seq
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MRVPLSWLREYAPVPEDATAEDVLATLVKVGLEEEDVHRPSDSLSGPIVVGQVLSMEPET
HSNGKTVNWCSVRVVPEGHEQTLTGKGIDPSGVQGIICGAHNFSVGDKVVVALPGAVLPG
DFRISARKTYGHISAGMIASVRELGIGDDHDGILVLSRIGLDPEIGSDALELLGLYDSAA
EVNVTPDRGYAFSIRGIAREYCHAVRAPFTDPVAELAPRVPASTEDGFPVTVSDDAPIHG
RAGCNRFAVRIVENVDPSIPSPQWLVSRLRLAGIRSLSLPVDISNYVMLEYGQPIHNYDA
DTLQGGITVRRARAGEKLTTLDDKSRELNTEDLVIADESGPVGLAGVMGGAATEVGENTT
RVLVEAARFDEVSIARTARRHKLPSEASKRYERGVDPQLAPVAAQRVVDLLVELAGGTDF
GRVTDVDHTDRPAAIELPAGYPAARVGVDYSPEVVERSLVAIGAEVTETADGWTVVPPSW
RPDLLEKEDLVEEVARLDGYDKIPDRLPVAPPGRGFTRSQAARRRVANTLAAAGLTEVLS
YPFVSQADNDLWGSADGEHVASIKLANPISEAQSLLRVSILPGLLEVLKRNHSRGLRDLA
LYEMGHVFLADGYTPDTQPIPPLGVRPAAPELERLDAAVPDQPRRLAAVLTGHDAAAGPW
VAPRTLDWQDALDIAVLAARSVGVELRVTQGSHHAFHPGRTAQLSTQDGAVIGMAGELHP
KLVAAQGLPERTCAVELDLSALLDREASAVTAQVISGYPAATQDVALVVDASVPAADLLT
TVRRGAGELLEASEVFDVYAGKGIPEGKKSVAIALRFRAADRTLTADEASQARENAVDAA
HREHGAEIRS
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atgcgagttcctttgtcatggctgcgcgagtacgcgcccgttcccgaggacgccaccgcg
gaggacgtcctggccaccctcgtgaaggtgggtcttgaggaggaggacgtccaccgcccc
tccgactccctctccggtccgatcgtggtgggccaggtgctctccatggagcccgagacc
cactccaacggcaagaccgtgaactggtgctccgtgcgcgtggtgccggagggccatgag
cagacgctgacgggcaagggcatcgacccctcgggcgtccagggaatcatttgcggtgcc
cacaacttctcggtgggtgacaaggtggtcgtcgcccttccgggtgcggtgctgccgggt
gacttcaggatctccgcgcgcaagacctacggccacatctcggcaggcatgatcgcctcc
gtgcgcgagctcggcattggcgacgaccacgacggcatcctggtgctgtctcggatcggg
ttggaccccgagatcggctccgacgccctggagctgctgggtctctacgactcggcggcg
gaggtcaacgtgaccccggaccgcgggtacgcgttctcgatccgcgggatcgcccgcgag
tactgccacgcggtgcgcgcaccgttcacggatcccgtggcggagctcgcgccgcgggtg
cccgcgtccaccgaggacgggttccccgtgaccgtgtccgacgacgccccgatccacggc
cgcgccgggtgcaaccgcttcgcggtgcgcatcgtggagaacgtggatccatccatcccg
tccccgcagtggctcgtgtcgcggttgcgcctggccgggatccgctccctgagcctgccc
gtggacatctccaactacgtgatgctcgagtacggccagccgatccataactacgacgcg
gacaccctgcagggcgggattaccgtgcgccgtgcgcgggccggcgagaaactgaccacg
ctggacgacaagtcccgtgagctgaacaccgaggacctcgtgatcgcggacgagtccggt
cccgtgggcctcgccggcgtcatgggcggtgccgcgaccgaggtcggggagaacaccacg
cgcgtgctcgtggaggccgcgcgcttcgacgaggtctcgatcgcccgcaccgcccgccga
cacaagcttccctcggaggcgtccaagcgatacgagcgcggcgtggacccgcagctcgcg
ccggttgctgcgcagcgcgtcgtcgacctcctcgtggagctggccggcggcacggacttc
gggcgggtcacggacgtggaccacacggaccgccccgccgcgatcgagctgcccgcgggc
taccctgcggcgcgcgttggagtggactactctccagaggtcgtcgagcgcagcctcgtg
gccatcggcgccgaggtcacggagaccgcggacggctggaccgtggtcccgccgtcgtgg
cgcccggatctgctcgagaaggaggacctcgtcgaggaggtcgcgcgtctggacggctac
gacaagatccccgatcgcctccccgtggcgcctcccgggcgcggcttcacgcgctcgcag
gccgcacgacgccgcgtggccaacacgctggcggccgccgggctcaccgaggtgctcagc
tacccgttcgtgtcccaggcggacaacgacctgtggggcagcgcggacggtgagcacgtg
gcgtcgatcaagctcgcgaaccccatcagcgaggcccagtccctgctgcgggtgagcatc
ctgcccgggctgctcgaggtgctcaagcgcaaccactcgcgcgggctgcgggacctagcc
ctctacgagatgggccacgtgttcctcgcggacggctacaccccggacacccagcccatc
ccgccgctcggcgtgcgcccggccgctccggagctcgaacggctcgacgccgccgtcccc
gaccagccgcgcaggctcgccgcggtgctcacggggcacgacgccgctgcaggcccgtgg
gttgcgccgcgcaccctggactggcaggacgcgctcgacatcgccgtgctcgccgcacgc
agcgtgggcgtggagctgagggtcacccagggctcgcatcacgcgttccaccccgggcgc
accgcgcagctgagcactcaggacggcgccgtgatcggtatggcgggagagctgcacccc
aagctcgtcgcggcccagggtctgcccgagcgcacgtgcgccgtggaactcgacctgtcc
gcgctgctcgatcgtgaggcctcggcggtcaccgcccaggtgatctcgggctaccccgcg
gccacccaggatgtcgcactcgtggtggacgcgagcgtccccgcggcggacctgctgacc
acggtgcgtcggggagcgggcgagttgctcgaagcatccgaggtcttcgacgtgtatgcg
ggcaagggcatccccgagggcaagaagtccgtggcgatcgccctgcggttccgggccgcg
gaccgcaccctcaccgcggacgaggcctcccaggcccgtgagaacgcggtggatgcggcc
cacagggagcacggcgctgagatccgaagctga
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