Kocuria sp. KD4: HBK84_09785
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Entry
HBK84_09785 CDS
T06521
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
kod
Kocuria sp. KD4
Pathway
kod03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
kod00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HBK84_09785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kod03400
]
HBK84_09785
Enzymes [BR:
kod01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
HBK84_09785
DNA repair and recombination proteins [BR:
kod03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HBK84_09785
Prokaryotic type
HBK84_09785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QIR70938
LinkDB
All DBs
Position
2176105..2176758
Genome browser
AA seq
217 aa
AA seq
DB search
MNEEWARALQPVEPQIRAVGEFLRAEHAEGHHTLPAGDHIFRALREPMSAVKVLIVGQDP
YPTPGHAMGLSFSVAPDVRPIPRSLQNIYKELHSDLGITPPAHGDLSSWAEQGVMLLNRV
LTVRAGSPASHRGKGWEAVTECAIRALGAREQPLVGILWGRDARGTKDWLGGAPTVESVH
PSPLSASRGFFGSRPFSRANELLQQQGAQPVSWELPA
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaggagtgggcccgtgccttgcaacccgtggagccgcagatccgggccgtgggc
gagttcctgcgcgccgaacacgccgagggccaccacaccctgcccgctggggaccacatc
ttccgcgcgcttcgcgagccgatgtccgcggtcaaggtgttgatcgtgggccaggacccc
taccccaccccgggccacgcgatgggcctctcgttctcggtggccccggacgtgcgcccg
atcccgcggtccctgcagaacatctacaaggaactgcactccgatctggggatcacgccg
cccgcgcacggggacctgtcctcgtgggccgagcagggcgtcatgctgctcaacagggtc
ctcacggtgcgcgcgggctcccccgcgtcccaccggggcaagggctgggaagcggtcacg
gagtgcgcgatccgcgcgctcggggcgcgcgagcaacccctcgtcggcatcctgtggggt
cgcgacgcccgcggcaccaaggactggctgggtggggcgcccaccgtggaatcggtgcac
ccgtccccgttgtccgcgtcccgggggttcttcggttcccgcccgttctcccgcgccaac
gagctgctgcaacaacagggcgcccagcccgtctcgtgggaactgcccgcgtag
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