Kocuria sp. KD4: HBK84_10035
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Entry
HBK84_10035 CDS
T06521
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
kod
Kocuria sp. KD4
Pathway
kod03030
DNA replication
kod03430
Mismatch repair
kod03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kod00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HBK84_10035
03430 Mismatch repair
HBK84_10035
03440 Homologous recombination
HBK84_10035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kod03032
]
HBK84_10035
03400 DNA repair and recombination proteins [BR:
kod03400
]
HBK84_10035
Enzymes [BR:
kod01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HBK84_10035
DNA replication proteins [BR:
kod03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HBK84_10035
DNA repair and recombination proteins [BR:
kod03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HBK84_10035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
AAA_16
DNApol3-delta_C
Mg_chelatase
nSTAND3
nSTAND_NTPase5
RuvB_N
AAA_22
AAA_28
AAA_18
AAA_29
AAA_5
RNA_helicase
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
QIR70322
LinkDB
All DBs
Position
2243451..2244578
Genome browser
AA seq
375 aa
AA seq
DB search
MSVWDEVVGQPRVVEQLQRAARDNDPTHAWLFTGPPGSGRSTAARALAAALLCEHGTGCG
ACHACRTAFAGTHADVTHFVTENPQISIEEARELVVKAQDRPSVGSWRIMIVEDADRMTE
RTSNVMLKSIEEPPPHTIWLLCAPSPMDVLVTIRSRCRPVTLKVPSPEDVARLLVARHGV
PEQRAIECARLSQCHVGVATRLALYDDARTRRQEVVSLPLSMHGVTRAVKAADRLHRLAV
DESTADAEARNNEEREQLLAAMGAPETGRVPPAIRGALNRLEADQKRRSRRIQTDTLDRF
LIDLTTFYRDVLSVQLDTGTALINQHLGEQIHGYATNTTAEHTLHKIDVISETRRRIRTN
VSAQLAFEAMMVAIV
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgtgtgggacgaggtcgtcggtcagccccgcgtggtggagcagttacaacgcgcg
gcgcgcgacaacgacccgacccacgcgtggctgttcaccgggcccccgggctccggtcgc
tccacggccgcgcgcgccctggccgcagcgctgttgtgcgagcacggcacgggctgcggc
gcgtgccacgcgtgtcgcacggcgttcgccgggacccacgcggacgtgacccatttcgtc
acggagaacccgcagatcagcatcgaggaagcccgcgagctcgtggtcaaggcgcaggac
cggccctccgtgggctcgtggcggatcatgatcgtcgaggacgccgaccggatgaccgag
cgcacctccaacgtgatgctcaagagcatcgaggaaccccctccgcacaccatctggttg
ttgtgcgccccctcccccatggacgtgctcgtgaccatccgttcccgctgccgccccgtg
accctcaaggtcccgtcccccgaggacgtcgcccggttgctcgtggcccggcacggggtc
ccggagcagcgcgccatcgagtgcgcgcggttgtcccagtgccacgtgggcgtggccacg
cgactcgccctgtacgacgacgcccgcacccgccgccaggaggtcgtctccctgccgctg
tccatgcacggggtgacccgggcggtcaaggccgcggaccgcttgcaccgcctcgccgtg
gacgagtccaccgcggacgccgaggcccgcaacaacgaggaacgcgagcagttgctcgcg
gccatgggtgcccccgaaaccggccgtgtgccacccgccatccggggtgccctcaaccgg
ctcgaagccgatcagaagcgacgctcccggcgcatccagaccgacaccctggaccgcttc
ctgatcgacctcaccacgttctaccgggacgtgctgagcgttcagctcgacaccgggacg
gccctgatcaaccaacacctgggtgagcagatccacgggtacgcgaccaacaccaccgcc
gagcacaccttgcacaagatcgacgtgatcagcgagacccggcgccgcatccgcaccaac
gtcagcgcacaactcgcgttcgaggccatgatggtggccatcgtctga
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