Kocuria sp. KD4: HBK84_10220
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Entry
HBK84_10220 CDS
T06521
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
kod
Kocuria sp. KD4
Brite
KEGG Orthology (KO) [BR:
kod00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kod03400
]
HBK84_10220 (radA)
DNA repair and recombination proteins [BR:
kod03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HBK84_10220 (radA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
DUF7125
AAA_22
ChlI
DnaB_C
AAA_16
AAA
nSTAND_NTPase5
AAA_14
Lon_C
AAA_29
SLFN-g3_helicase
AAA_19
NACHT
AAA_24
TniB
ABC_tran
NTPase_1
nSTAND3
AAA_5
Viral_helicase1
AAA_18
Ribosomal_L44
RecA_N
KdpD
Motif
Other DBs
NCBI-ProteinID:
QIR70351
LinkDB
All DBs
Position
2288408..2289799
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AA seq
463 aa
AA seq
DB search
MSAKTRKPSVSYRCTECGWTTAKWVGRCGECQSWGTVQEISTNLEHGRTRAAASVAVPAQ
PIGQVDSSVARFTPTRVTEFDRVLGGGLVPGAVILIAGEPGVGKSTLLLDAAAKVAGGPD
PRTVLYVTGEESAAQVKLRAERIDALSEKLYLTAETDLSAALAQVKDLKPELLIVDSVQT
LASPEIEGSAGGVSQVREVAASLIHAAKTRNMTTLLVGHVTKEGSIAGPRLLEHLVDVVC
QFEGDKHSRIRLLRAVKNRFGPTDEVGCFDLEENGIRSVSDPSGLFVSRTPVPVAGTCLS
VTVEGRRPLLAEVQALLDKSSTAQPRRATSGLDGSRVAMLLAVLQRRAGVALATMDCYVS
TVGGVRLTEPATDLAVCMALASAAQDRPLPQRLVCFGEIGLAGEVRPVPEINRRIQEVAR
LGFTHAVVPASPNGPGKIPPGFSVREVTTVSQAMELLFPPRQG
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgaagaccaggaagccgtccgtctcctaccggtgcacggaatgcggctggacc
acggccaaatgggtgggccggtgcggtgagtgccagtcctggggcaccgtgcaggagatc
tccacgaacctggaacacgggcgcacccgggccgcggccagcgtggcggtgcccgctcaa
cccatcggccaggtggattcctcggtggcccgcttcacccccacgcgcgtcaccgagttc
gaccgcgtcctgggcggcggactcgtgcccggtgcggtcatcctgatcgcgggggaaccc
ggcgtgggtaagtccacgctgctcctggacgcagccgccaaggtggcgggcgggcccgat
ccccgcaccgtgttgtacgtgaccggggaggagtccgcggcgcaggtcaaactgcgggcc
gagcgcatcgatgccctctcggaaaagctgtacctcaccgcggagaccgacctctccgcg
gcgctcgcgcaggtcaaggacttaaaaccggaactgttgatcgtggactcggtgcagacc
ctcgcgagcccggagatcgagggttcggcgggcggggtgagccaggtgcgggaggtcgcg
gcgagcctcatccacgccgccaagacccggaacatgaccaccctgctcgtgggccacgtg
accaaggagggttcgatcgccggtccccggttgctcgaacacctcgtggacgtcgtgtgt
cagttcgagggggacaaacactcgcgcatccgcctactgcgggccgtgaagaaccggttc
ggccccacggacgaggtcgggtgcttcgatctcgaggagaacggtatccgctcggtctcg
gacccgtccggcctgttcgtctcccgcacccccgtcccggtcgcgggaacatgtctgagc
gtcaccgtggaggggcgcaggccgctgctcgcggaggtccaggccctgctggacaagtcc
agcaccgcgcaaccccgacgggccacctccggcctggacggttcccgggtggccatgctg
ctcgcggtgttgcagcgccgggcgggcgtggccctcgcgaccatggactgctacgtgtcc
accgtgggcggtgtgcggctcaccgaacccgccacggacctcgcggtgtgcatggcgctc
gcgtccgccgcccaggatcgaccgctgccccagcggctcgtgtgcttcggggagatcgga
ctggccggtgaggtccgccccgtacccgagatcaaccgcaggatccaggaggtcgcccgg
ctgggcttcacccacgccgtggtcccggcatcccccaacggacccggcaagatccctccg
ggcttctccgtgcgtgaggtcaccaccgtctcacaggccatggagctgctcttcccgccg
cggcagggctga
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