Kocuria sp. KD4: HBK84_10335
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Entry
HBK84_10335 CDS
T06521
Symbol
dacB
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
kod
Kocuria sp. KD4
Pathway
kod00550
Peptidoglycan biosynthesis
kod01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
kod00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HBK84_10335 (dacB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
kod01002
]
HBK84_10335 (dacB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
kod01011
]
HBK84_10335 (dacB)
Enzymes [BR:
kod01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
HBK84_10335 (dacB)
Peptidases and inhibitors [BR:
kod01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
HBK84_10335 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:
kod01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
HBK84_10335 (dacB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
PRTP
Motif
Other DBs
NCBI-ProteinID:
QIR70373
UniProt:
A0A6G9V4E6
LinkDB
All DBs
Position
complement(2311876..2313315)
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AA seq
479 aa
AA seq
DB search
MPAPPPSTSARRRSWPLACALLALAVLVAATFAVPAVVAELRPAWQHAQDADDAAASPDP
AAAGLAAASGTVDAEGVAEALDAGLTGAPGTVAAAVAVAGEDSVVAGRSPERPMVPASNQ
KVLTALALAATVDPYERLETTVVRGDQPRKLVLVAGGDTLLAPGEGRADAVNGHAGLGTL
AERTAQALRQDDPDAAASGQWTVELDTDLFAGPELNPAWEGEDIAAGEITRVAPVALYSH
RVPTADGADPGSRGERPQDPAAAVTREFARQLEQRLGAGASVTVGGAASAPEDAVGLARV
ASAPVSEQSAYMLAHSDNSLAESLARVAAVASGREGSVTGVQELIPAALAEHGIDTEGLR
AADASGMAQQDRVSATTLARVVDTLVTDPRYGPYGRGLPLAGAQGTLSERFDDPAEAAAR
GVTRAKTGTLLDVVALSGYVQRADGSVLVYSLVLNGVSGDTTRAKDTVDRTVAALARSA
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcacccccaccgagtacctccgcgcgtcgccgctcctggcccctcgcgtgtgca
ctgctcgcgctcgcggtgctcgtcgcggcaacattcgccgtgcccgcggtcgtcgcggag
ctacggccggcatggcagcacgcgcaggacgcggacgacgccgcggcgtcgcccgatccc
gctgcggccggtctggcggcagcgtccgggacggtggatgccgagggcgtggcggaggcc
ctggacgcgggtctgaccggggccccgggaaccgtggcagccgccgtggcggtggcgggg
gaggactccgtggtcgcggggcggtcgccggagcggcccatggtgccggcgtcgaaccag
aaggtgctgaccgccctggcgctggccgcgaccgtggacccgtacgaacgactggagacc
accgtggtccggggggatcagccgcggaaactcgtcctggtggccggtggtgacaccctg
ctcgctccgggcgaggggcgggcggatgcggtcaacggtcatgcgggactggggacgctc
gcggaacgcaccgcgcaggcactgcgacaggacgatcccgacgccgcggcctccgggcag
tggaccgtggaactggacacggacctgttcgccggaccggagctgaaccccgcgtgggag
ggggaggacatcgccgccggggagatcacccgtgtggcgcccgtggccctgtattcccac
cgggtgcccaccgcggacggcgcggacccgggctcccgcggcgaacggccccaggacccc
gcggccgcggtcacgcgagaattcgcgcgccagctcgaacagcgcctgggcgcaggggcg
agcgtcacagtgggaggcgccgcgagtgccccggaggacgccgtggggctcgcgcgcgtg
gcatccgcgcccgtgtccgaacagagtgcctatatgctcgcgcactcggacaattccctc
gccgagagcctcgcgcgggtcgccgcggtggcctccggacgtgagggcagcgtgacgggt
gtgcaggagctgatcccggccgccctggccgagcacgggatcgacaccgagggcctgcgg
gccgcggacgcgagcgggatggcgcagcaggacagggtcagcgccaccacactcgcccgc
gtggtggacaccctggtcacggatccccgctacggtccgtacggccgggggctgccactg
gcgggagcccagggaacgctctcggagcgcttcgacgacccggcggaggccgcggcgcgc
ggtgtcacccgggccaagaccgggaccctgctggacgtcgtggcgctgtccgggtacgtg
caacgcgccgacggcagcgtgctcgtgtactccctggtgctcaacggggtcagcggggac
accacccgggccaaggacaccgtggatcgcacggtggccgcgctcgcgagatctgcgtga
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