Kocuria sp. KD4: HBK84_12050
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Entry
HBK84_12050 CDS
T06521
Name
(GenBank) DNA-3-methyladenine glycosylase 2 family protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
kod
Kocuria sp. KD4
Pathway
kod03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
kod00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HBK84_12050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
kod03000
]
HBK84_12050
03400 DNA repair and recombination proteins [BR:
kod03400
]
HBK84_12050
Enzymes [BR:
kod01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
HBK84_12050
Transcription factors [BR:
kod03000
]
Prokaryotic type
Helix-turn-helix
AraC family
HBK84_12050
DNA repair and recombination proteins [BR:
kod03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HBK84_12050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
HHH
Motif
Other DBs
NCBI-ProteinID:
QIR70659
LinkDB
All DBs
Position
2697431..2698933
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AA seq
500 aa
AA seq
DB search
MPPQDSSFDERYRAVESRDGRFDGQFVTAVRTTGIYCRPSCPARKPHRENVRFYRTSAAA
HAAGYRACKRCVPEAVPGSPEWDLRGDVVGRAMRLITEGVVDREGVLGLARRVGYSTRHL
TRVLTEELGAGPLALARAHRAQTARALLTQTDLPVAETAFAAGFSSIRQCNEVIREVYDM
TPQQLRARSTSTGPSGHGAASEPGEVDLALSYREPLDVRGLFVWFAVHAVDGVEVGTPAS
YTRALSLPGGPAWLRVYERAGRLRLRTRVTDLADLPVLIARVRRLFDLDADPQAVAAALS
RVPVLRPLVEAAPGLRVAGSADPHETLIRTLIGQQISLAAARTVLGARARDMGEPAPSFA
TGIRYMFPTAAAIAEHGVQFLGGPAARVQAVLGAARALASGDLQLSPGDDATQQRAALLT
LPGVGPWTADHVRMRVTGDPDVFLIDDGAMRAGARRLGLPDTKPALVDWAGAAAPWRSYA
TTHLWGPLTPPASFSESVPS
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgccccctcaagactcctcgttcgacgagcgctaccgggctgtcgagtcccgggacggg
cgcttcgacgggcagttcgtgaccgcggtgcgcaccaccgggatctactgccgcccgagc
tgccccgcgcgcaagccccaccgcgagaacgtgcgcttctaccgcacgagcgcggccgcc
cacgccgccgggtaccgcgcctgcaaacgctgtgtcccggaagccgtgccggggtccccg
gagtgggatctgcgcggggacgtggtggggcgcgccatgcggctcatcaccgagggggtc
gtggaccgcgagggcgtgctgggactcgcgcggcgcgtgggatattccacgcgccacctc
acccgcgtgctgaccgaggaactcggcgccggaccgctcgcgctcgcccgcgcccacagg
gcccagacggcgcgcgccctactgacgcagacggacttgccggtcgcggagaccgcgttc
gccgcgggattctcgagcatccgacagtgcaacgaggtgatccgcgaggtgtacgacatg
accccgcagcaattgcgggcgcgcagcacgagcaccggaccctcgggacacggcgcggcg
agtgagccgggcgaggtggacctcgcgttgagctatcgcgagcccctggacgtgcgcggg
ctgttcgtgtggttcgcggtccatgcggtggacggcgtggaggtcgggacccccgcctcc
tacacccgcgcgctgagcctgcccggcggcccggcctggctgcgcgtgtacgagcgcgcg
gggcggttgcggttgcgcactcgggtcacggatctcgcggacctgcccgtgctgatcgcc
cgggtgcgtcggctcttcgacctggacgccgatccgcaggcagtggccgccgcgctgtcc
cgcgtcccggtgttgcgcccgctggtcgaggccgccccggggctgcgggtcgccggttcc
gcggacccgcacgagacgttgatccgcacgctcatcggtcagcagatctccctggccgcg
gcccgcaccgtgttgggtgcccgcgcgcgggacatgggagagcccgcgccctccttcgcc
acgggcatccggtacatgttcccgaccgcagcggccatcgccgagcacggcgtccagttc
ctgggcgggccggccgcgcgggtccaggcggtcctgggtgctgcccgcgcgctcgcctcg
ggtgatttgcagttgtcccccggcgacgacgccactcagcaacgcgccgcgctcctcacc
ctccccggggtggggccatggaccgcggaccacgtgcgcatgcgggtcaccggggacccg
gacgtgttcctgatcgacgacggggccatgcgcgccggtgcccgacggctcgggctcccg
gacaccaaacccgcactcgtggactgggcaggggccgctgccccatggcgcagttacgcc
accacccatctgtggggcccgctgacccctcccgcatccttctcggaaagtgtgccgtca
tga
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