Klebsiella michiganensis E718: A225_0153
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Entry
A225_0153 CDS
T02173
Name
(GenBank) Transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
koe
Klebsiella michiganensis E718
Pathway
koe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
koe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A225_0153
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
koe03021
]
A225_0153
03019 Messenger RNA biogenesis [BR:
koe03019
]
A225_0153
Transcription machinery [BR:
koe03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
A225_0153
Messenger RNA biogenesis [BR:
koe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
A225_0153
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
AAA_22
AAA_25
S1CSD-TOTE-2
AAA
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
AFN30097
LinkDB
All DBs
Position
161514..162773
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AA seq
419 aa
AA seq
DB search
MNLTELKNTPVSELITLGENMGLENLARMRKQDIIFAILKQHSKSGEDIFGDGVLEILQD
GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNEVN
YDKPENARNKILFENLTPLHANSRLRMERGNGSTEDLTARVLDLASPIGRGQRGLIVAPP
KAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVVASTFDEPASRHV
QVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRF
FGAARNVEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRVFPAIDY
NRSGTRKEELLTTQEELQKMWILRKIIHPMGEIDAMEFLINKLAMTKTNDDFFDMMKRS
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttaccgaattaaagaatacgccggtttctgagctgattactctcggcgaaaat
atggggctggaaaacctggcccgtatgcgtaagcaggatattatttttgccatcctcaag
cagcattcgaagagtggcgaggatatctttggcgatggcgtactggagatactgcaggat
ggatttggtttcctccgttcagcagacagctcctacctcgccggtcccgacgacatctac
gtatcccccagccaaatccgccgcttcaacctccgcactggtgacaccatttccggtaag
attcgtcctcctaaagagggtgagcgttactttgcgttgttgaaagttaacgaagttaac
tacgataagccggaaaacgcgcgtaacaagattctgttcgagaacttaacccctctgcac
gcaaattcacgtctgcgtatggagcgtggtaacggctcaacggaagacttaaccgctcgc
gtcctggatctggcatcgccgatcggccgtggccagcgtggtctgattgttgcgccgccg
aaggccggtaaaaccatgctgctgcagaacatcgcgcagagcattgcgtacaaccatcct
gattgcgttctgatggtactgctgatcgacgaacgtccggaagaagtgaccgagatgcag
cgtctggttaaaggtgaagttgtcgcttctacctttgacgagccggcatctcgccacgtt
caggttgccgagatggttatcgagaaagcgaagcgtctggttgagcataagaaagacgtt
atcatcctgctcgactccattacccgtctggcgcgtgcctacaacaccgtcgtcccggct
tccggtaaagtgttgaccggtggtgtggacgccaacgccctgcatcgtccgaagcgtttc
ttcggtgccgcgcgtaacgtggaagagggcggcagcctgacgattatcgctacggcgctg
atcgataccggttctaaaatggacgaagttatctacgaagagtttaaaggcaccggtaac
atggagcttcacctctctcgtaagatcgcagaaaaacgcgtcttcccggctatcgactac
aaccgttccggtacccgtaaagaagagctgctcaccactcaggaagagctgcagaagatg
tggatcctgcgtaaaatcattcacccgatgggtgagattgacgcgatggaattcctcatc
aataaactggcgatgaccaaaactaacgatgacttcttcgacatgatgaagcgctcgtaa
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