Klebsiella michiganensis E718: A225_4427
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Entry
A225_4427 CDS
T02173
Name
(GenBank) ATP-dependent RNA helicase SrmB
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
koe
Klebsiella michiganensis E718
Brite
KEGG Orthology (KO) [BR:
koe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
koe03009
]
A225_4427
Enzymes [BR:
koe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
A225_4427
Ribosome biogenesis [BR:
koe03009
]
Prokaryotic type
rRNA helicases
A225_4427
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AFN33713
LinkDB
All DBs
Position
4666761..4668092
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AA seq
443 aa
AA seq
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MTVTTFSELELDENLLDALQDKGFTRPTAIQAAAIPPALDGRDILGSAPTGTGKTAAYLL
PALQHLLDFPRKKSGPPRILILTPTRELAMQVADHARELAKHTHLDIATITGGVAYMNHA
EVFSENQDIVVATTGRLLQYIKEENFDCRAVETLILDEADRMLDMGFAQDIEHIAGETRW
RKQTMLFSATLEGDAIKDFAERLLEEPVEVSATPSTRERKKIHQWYYRADDVKHKTALLV
HLLKQPEATRSIVFVRKRERVHELAGWLREAGINTCWLEGEMVQAKRNEAISRLTDGRIN
VLIATDVAARGIDIADVSHVFNFDLPRTADIYLHRIGRTGRAGKKGTAISLVEAHDHLLL
GKIGRYIEEPLKARVIDELRPTTRAPSEKQTGKPSKKVLAKRAEKKEKEKEKPRVKKRHR
DTKNIGKRRKPSAADAPQKSNEE
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgactgtaacgactttttccgaacttgaactcgacgaaaacctgctggacgccctccag
gataaaggtttcacacgcccgacagccattcaggccgccgctattccgcctgcgcttgat
ggccgtgatattctcggttcagccccgaccggcaccggtaaaacggcggcgtatctcctg
ccagcgttgcagcatctgctcgattttccgcgcaagaagtctggtccgccgcgcattctt
atcctgacccccacgcgcgaactggcgatgcaggttgccgaccatgcgcgtgagctggca
aaacatactcatctggatatcgccacgatcaccggcggtgtcgcctatatgaaccatgcc
gaagtgttcagcgagaaccaggacatcgtggtcgccacgaccggtcgcctgctgcaatat
attaaagaagaaaactttgattgccgcgccgttgaaacgctgatccttgatgaagcggac
cgcatgctggacatgggcttcgcgcaggatatcgaacacattgccggtgaaacccgctgg
cgtaagcagaccatgctgttctccgccaccctcgaaggtgacgccattaaagattttgct
gagcgtctgctggaagaaccggtggaagtctctgcgaccccctccacccgcgagcgtaaa
aagattcaccagtggtattaccgcgccgatgacgtcaagcataagaccgctctgctggtc
catctgctaaagcagccggaagcgacgcgttctatcgtcttcgtccgtaagcgcgagcgc
gtgcatgagctggcgggctggctgcgtgaagcgggtatcaacacctgctggctggaaggc
gagatggtacaggcaaaacgtaatgaagcgattagccgcctgaccgatggccgtattaac
gtgttaatcgccaccgacgttgccgcgcgcgggatcgacatcgcggacgtcagtcacgtt
ttcaacttcgacttgccgcgcacggccgacatctatctgcaccgtatcggtcgtaccgga
cgcgcgggtaaaaagggaacggccatctctctggtcgaagcccacgaccatctgctgctg
ggtaaaattggccgctatattgaagagccgttaaaagcccgcgtcatcgatgaactgcgc
ccgaccactcgcgcacccagcgagaagcaaaccggtaaaccttccaagaaggttttagcc
aagcgtgcagagaagaaagagaaagaaaaagagaaaccgcgcgtgaaaaaacgccatcgc
gataccaaaaacattggtaagcgtcgtaaaccaagcgcagcggatgctccgcagaagtca
aacgaagagtaa
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