Klebsiella michiganensis E718: A225_4779
Help
Entry
A225_4779 CDS
T02173
Name
(GenBank) Exodeoxyribonuclease V beta chain
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
koe
Klebsiella michiganensis E718
Pathway
koe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
koe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
A225_4779
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
koe03400
]
A225_4779
Enzymes [BR:
koe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
A225_4779
DNA repair and recombination proteins [BR:
koe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
A225_4779
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_22
AAA_11
AAA_25
Motif
Other DBs
NCBI-ProteinID:
AFN34001
LinkDB
All DBs
Position
complement(5012178..5015723)
Genome browser
AA seq
1181 aa
AA seq
DB search
MTDTAESLDPLRLPLTGERLIEASAGTGKTFTIAALYLRLLLGLGGESAFPRQVSVEELL
VVTFTEAATEELRGRIRSNIHELRIACLRESTDNPLYAGLLAEIADKTQAAQTLLLAERQ
MDEAAVFTIHGFCQRMLSLNAFESGMLFEQQLIEDESRLRYQACADFWRRHCYPLPRDIA
AVIHEAWKGPRDLLKSIDRWLQGEAPQLKSPPPADETLAERHQQIIERINALKQQWLAQV
GEVEAVLENSALDRRKFNRGNQGKWLEKVTAWAQEETLSYQLPDALEKFSQAFLLERTKA
DGAPPVHPLFSAVEALLATPLTLTDLVIARAMVEIREAVAREKRRRGELGFDDMLSRLDD
ALRGESGEALASAIRQRFPVAMIDEFQDTDPQQYRIFRRIWRRQADTELLLIGDPKQAIY
AFRGADIFTYMKARGDVTAHYTLDTNWRSAPGMVDSVNRLFSLSDNPFMFREIPFMPVKS
ADKNQGLRFTVDDAAVPAMNIWLMSGEAVGAGDYQAFMAQLCAAQIRDWLSAGQQGKALL
WRGEKAEPVRASDITVLVRNRQEASLIRDALQLLSIPSVYLSNRDSVFETPEAQELLWVL
QAVLAPERENTLRSALATAMFGLNAQDIENLNQSERAWDELVEEFSGYRQVWRQRGVMPM
LRALMTARRIAENLLATSGGERRLTDILHISELLQEAANQLESEHALVRWLAQHIAEPDS
NASSQQMRLESDKHLVQIVTIHKSKGLEYPLVWLPFIARFRKQDQAFYHDRTSFAAVLDL
GQAEGSMELAEAERLAEDLRLLYVALTRAVWHCSLGVAPLSTRRSDKPGASDFHHSALGR
LLQGGEAMDAAGLMARLQAFCSGEIALQLPDTAAPTPWQAPQAALPPLSARLLARSVTDD
WRVTSYSGLQQNGHSAAQDLLPRLDVDAAGVGEVAEEPQLTPHQFPRGASPGTFLHSLFE
DLDFTQPVPADWMAARLQLSGFEEKWTPVLTAWLDGVLRTPLPGAGIALNQLSEGDKQVE
MAFYLPIEQPLDPLRLDALIRQYDPLSVDTPTLDFRQVRGMLKGFIDLVFRHNGRYYLLD
YKSNWLGENREAYTQDAMRQAMRSHRYDLQYQLYSLALHRYLRHRIADYDYERHFGGVIY
LFLRGMDGQDGGQGIFATRPALPLINGLDALFAGETQEVVL
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacaccgccgagtctcttgacccactgcgcttgcccctgacgggcgagcgcctg
atagaagcctctgcgggcacaggaaaaacctttaccattgccgccctctatctgcggctg
ctgctggggctgggcggggaatccgcctttccccgccaggtcagcgtggaagagctgctg
gtagtgacctttaccgaagcggcgaccgaagagctgcgcgggcgtattcgcagcaatatc
cacgagctgcgtatcgcctgcctgcgcgaaagtaccgacaatcctctctacgccgggctg
ctggcggaaatcgccgataaaacccaggcggcgcaaacgctgctgctggccgaacggcag
atggacgaagcggcggtatttaccattcacggcttctgccagcggatgctgagccttaac
gcctttgaatccggcatgctgttcgaacagcagctgattgaagatgaatcccgcctgcgc
tatcaggcctgcgccgacttctggcgtcgccactgttacccactgccgcgtgacatcgcg
gcggttatccacgaagcgtggaaagggccgcgcgatctgctgaaatccatcgaccgctgg
ctacagggagaggcgccgcagctcaaatcgccgccgccggctgacgaaacgctggccgaa
cgccatcagcaaattatcgaacgcatcaacgcgctgaagcagcagtggctggcacaggtg
ggcgaggttgaggcggtgctggaaaactcggccctcgaccggcgcaagtttaatcgcggc
aatcaggggaaatggctggagaaagtgaccgcctgggcccaggaagagaccctgagctac
cagcttccggatgcgctggagaagttctcccaggccttcttgcttgagcgcaccaaagcg
gacggcgcgccgccggtacacccgctgttcagcgcggtagaagcgctgctggcgacaccg
ttaaccttgaccgatctggtgattgccagggcgatggttgaaatccgcgaagcggtcgcg
cgggagaaacgccgccgcggcgagctgggctttgacgatatgcttagccgcctggatgac
gccctgcgcggggagagcggcgaagcgctggccagcgcgattcgccagcgctttccggtg
gcgatgatcgacgaatttcaggataccgacccccagcagtaccgaatctttcgccgcatc
tggcggcgccaggctgacaccgagctgctgctgattggtgaccccaaacaggccatttac
gccttccgcggcgcggatatctttacctacatgaaagcgcgtggggacgtcaccgcccac
tatacgctcgataccaactggcgctccgcgccggggatggttgatagcgtcaatcgcctg
tttagcctcagcgataacccctttatgttccgcgaaatcccgtttatgccggtgaagtcg
gccgataaaaaccaggggctgcgctttaccgtcgatgatgctgcggtaccggcgatgaat
atctggctgatgtcgggcgaggccgtcggggcgggggattaccaggcgtttatggcccag
ctgtgcgcggcgcaaattcgcgactggctcagcgcgggccagcagggcaaggcgctgctg
tggcgcggtgaaaaagctgaacccgtgcgggcttcggacatcacggtgctggtgcgcaat
cgtcaggaggcgtcgttaattcgcgatgcccttcagctgctgtcgattccctccgtttat
ctctccaatcgcgatagcgtgtttgaaacccccgaggcgcaggagctgctgtgggtgctg
caggcggtgctggcccccgagcgggaaaataccctgcgcagcgcgctggcgaccgcaatg
ttcggcctcaacgcgcaggacattgaaaacctcaaccagagcgaacgggcctgggatgag
ctggtagaagagtttagcggctaccggcaagtctggcggcagcgcggcgtgatgccgatg
ctgcgcgcgctgatgaccgcgcggcgcattgccgaaaacctgctggcgaccagcggcggc
gagcggcgcctgaccgatatcctgcatatcagcgagctgctacaggaggcggcgaaccag
ctggagagcgaacatgcgctggtgcgctggctggcgcagcatatcgccgagccggatagc
aacgcctccagccagcagatgcgcctggagagcgataagcacctggtgcagatcgtcact
atccataaatcgaaagggctggagtatccgctggtctggctgccgtttattgcgcgtttc
cgtaaacaggatcaggcgttttatcacgacagaacctcctttgccgccgttctcgacctg
gggcaggcggagggcagcatggagctggcggaggccgaacgcctggccgaagatctgcgc
ctgctttacgtcgcgcttacccgtgcggtctggcactgcagccttggcgttgcgccgctc
agcacccggcgcagcgacaagcccggcgccagcgattttcaccacagcgcgctgggccgc
ctgctgcagggcggggaagcgatggatgccgcagggctgatggcccgtctgcaggcgttc
tgcagcggagagatcgccctgcagctcccggatacggctgcgccaacgccgtggcaggct
ccgcaggcggcgctaccgccgctttcagcccgtttgctcgcgcgttcggtgaccgatgac
tggcgggtcaccagctactccggcctgcagcagaatggacacagcgcggcgcaggatctt
ctgccgcgtctggatgtcgatgccgctggcgtcggtgaggtcgcggaagagccgcagctt
acgccgcaccagttcccccgcggcgcgtcgccggggacgtttctgcacagtttgttcgaa
gatctcgattttacccagccggttcccgccgactggatggcggccaggctccagctgagc
ggcttcgaggaaaagtggaccccggtactgaccgcatggctcgacggcgtgctgcgtacc
cctctgcccggcgcgggcatcgcccttaatcagctgagcgaaggcgataaacaggtggag
atggcgttttatctgcccatcgaacagccgctggatcccctgcgtctggatgcgctgatt
cgtcagtacgatccgctctccgtggataccccaacgctcgatttccgccaggtgcgtggg
atgctgaaaggctttatcgacctggtgtttcgccacaacggccgctattacctgctggat
tacaaatccaactggctgggggaaaatcgcgaggcctatacccaggacgcgatgcggcag
gcaatgcgttcgcaccgttacgatttgcagtatcagctctatagcctggcgctgcaccga
tatttacgccaccgcattgccgattatgattacgaacgccacttcggcggcgttatttat
ctctttttacgcggcatggacgggcaggacggcgggcagggtatcttcgccacccggccg
gcgctgccgctgattaacggcctcgatgcgctgtttgccggggaaacccaggaggttgtg
ctatga
DBGET
integrated database retrieval system
