Komagataeibacter oboediens: LV478_04090
Help
Entry
LV478_04090 CDS
T08952
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
koi
Komagataeibacter oboediens
Brite
KEGG Orthology (KO) [BR:
koi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
koi03400
]
LV478_04090 (addB)
Enzymes [BR:
koi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LV478_04090 (addB)
DNA repair and recombination proteins [BR:
koi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
LV478_04090 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
WEQ52737
LinkDB
All DBs
Position
complement(373830..376880)
Genome browser
AA seq
1016 aa
AA seq
DB search
MTGPTTACVRGRAAVVPSHVPFVDQIAARWLEQAGHDAQACGNGLILLPSRRAARALTEA
FVRQVDGRPILLPRIAPIAALDEASLALSGCSALDLPPAVDPVRRLATLTLLVMQAGRAF
GDVQGVDQAWPLARALADLMDEAEWAECDLCERLPHAAEGDFAQHWHQTLKFLSIVTSVW
PAWLAEQGVMNPVARQTGLLHAQAARWMETPPPAGYPIWAAGFSDAVPSTIAMLRAVLSL
PDGLLVLPGVDMDCADDVWQRLPPDHPQAGTAHMLAELGMERACMERWDTIADGDVASSP
VSRASLLARALLPAHALDRWRAPDAPVAADGLSVLRSADQQEEAAAIAMVLRQVLEQPGR
RAALVTPDRALAGRVATELVRWGVIADDSAGESLLTIPQTAFLRLIVQAVDGGLSPVALL
SVIKHPLAACGLSPGNCRASARQLERLVLRGPAPPPGIAGLRRALVRAADDPHGALADAP
DAPEEINAFLNRLETAFGPLLALPGSTLVPVSVLLAALVETAQALAATDTMDGADRLWAG
EEGNALGQHMSAMLAWCDVLPDARLGALDGLLASSLAGMTVQGRRAVRGREGTAVHPRVF
IWGLLEARLQTADTIVLGGLVETVWPPATDPGPWMSRPMRTRVGLPSPEWAIGQAAHDFV
SCACAAPDVVLSLAARRQGAPTVPARWLVRLDAYLAGHGHGLPTHPALRWLDSLDRPAGA
AVPVAPPRPRPAVGLRPRSLSVTEIETWMRDPYAIYARRILRLRPLADLEELADAADYGQ
IVHAALDRWFRAHPADWPHDGAARMRDVFADVLREAALRPALAAWWAPRLERIATWCAQA
EETRRATGGPRTVLTELAGQMRLEDLPGGPFTLRGRADRIDLHGDGSLSLFDYKTGTLPT
RRSVMEGWQSQLVLEAAMIECGGFPPPVAGTVAELVYWRLTGGHVPAQVLDVARGTELAE
LIAGCRRGLRDLVTAYDNPDQPYLSHPFPGEEPRFADYAHLARVAEWSAAREENGA
NT seq
3051 nt
NT seq
+upstream
nt +downstream
nt
atgaccgggcccacgactgcctgtgtgcgggggcgggcggcagtcgtgccgtcccatgtg
ccgtttgtcgaccagatcgccgcccgctggctggaacaggctggccatgatgcacaggcc
tgcggcaatggcctgatcctgctgcccagccgccgcgccgcccgtgcgttgaccgaagcc
tttgtccgtcaggttgatggccgtcccattctgctgccccgcattgcgcccatcgcggcg
ctggacgaagcatcgctggcactgtcggggtgcagtgcgctggacctgccgcccgcggtg
gatcccgtgcggcggctggcgacgctgacgctgctggtcatgcaggcgggcagggcgttt
ggcgatgtgcagggcgtggatcaggcatggccgctggcgcgcgcgctggcggacctgatg
gatgaggcggaatgggcggaatgcgacctgtgcgaacgcctgccccatgcggcggaaggt
gactttgcccagcactggcaccagacgttgaaattcctgtccatcgtgaccagtgtgtgg
cccgcatggctggcggaacagggggtgatgaaccccgtcgcccgccagaccggcctgctg
cacgcgcaggccgcgcggtggatggagacgccgccaccagcaggttaccccatatgggcc
gcgggtttttccgatgccgtgccctccaccatcgccatgctgcgggccgtgctgtccctg
cccgacggactgctggtgctgcccggcgtggacatggactgtgccgatgatgtctggcag
cgcctgccacccgatcatccgcaggctggcacggcgcatatgctggccgaactgggtatg
gaacgtgcctgcatggaacggtgggacaccatcgccgatggggatgtggccagcagtccc
gtctcccgcgccagcctgctggcccgcgcattgctgcccgcccatgcgctggaccgctgg
cgcgcgcccgacgccccggttgcggccgatggcctgtcggtcctgcgtagtgccgaccag
caggaagaagccgccgccatcgccatggtgctgcggcaggtgctggaacagccgggccga
cgggcggcccttgtcacccccgaccgggcgctggccggacgggtggcgacggaactggtg
cgctggggcgtcattgccgatgacagcgctggcgaaagcctgctgaccataccacagacc
gcctttctgcggctgatcgtgcaggcggtggatggcggcctgtcgccggtggccctgctg
tccgtcatcaagcatccgctggcggcgtgcgggctgtcgccgggcaactgccgcgccagt
gcgcgacagcttgaacgtcttgtgctgcgtgggccggcaccgccgccgggtatcgcgggg
ttgcgccgcgcactggtgcgcgcggcagatgacccgcatggcgcgctggccgacgccccg
gatgcgccggaggaaataaacgccttcctcaaccgtctggaaaccgcctttggcccgctg
ctggccctgccgggcagcacgctggtgccggtatccgtcctgctggcggcactggttgaa
accgcgcaggcgctggctgcgaccgacaccatggatggcgcggaccggctgtgggcaggc
gaggaagggaatgcgctgggccagcatatgagtgcaatgctggcatggtgcgatgtcctg
cccgatgcacgtctgggcgcgctggacgggctgctggcctcgtcccttgcgggcatgacg
gtgcagggacggcgcgccgtgcgtgggcgtgaggggacggcggtgcatccgcgcgtgttc
atctgggggctgctggaagctcggctgcagacggcggataccatcgtgctgggtggtctg
gtcgaaaccgtctggccacccgcgaccgatcccggcccgtggatgagccgccccatgcgc
acgcgtgtcggtctgccatcacccgaatgggccattggtcaggccgcgcatgatttcgtg
tcctgtgcctgtgccgccccggatgtggtgctgtcgctggcggcccggcggcagggtgcg
ccaacggtgcccgcgcggtggctggtgcggctggatgcctatctggcggggcatggacac
ggtctgcccacgcatccggcgctgcgctggctggacagcctggaccgtccggccggggcg
gcggtgcctgttgccccgccacggccgcgtccggcggtgggcctgcgcccgcgcagcctg
tcggtgacggaaatcgaaacatggatgcgcgacccctacgccatttacgcgcggcgtatt
ctccggctgcgcccgcttgcggatctggaggagctggccgatgccgccgattacgggcag
atcgtgcatgccgcgctggaccgctggttccgtgcccatcccgctgactggccccatgat
ggcgccgcccgcatgcgcgacgtctttgccgatgtgctgcgcgaggcggccctgcgtccc
gcccttgcggcatggtgggcgccccggctggaacgcatcgccacgtggtgcgcgcaggcc
gaggaaacgcgccgcgccactggcggcccccgaaccgtgctgacggaactggcgggtcag
atgcggctggaggatctgcccggtggtccgtttaccctgcgggggcgtgcggaccggatc
gacctgcatggcgatggcagcctgagcctgtttgactacaagaccggcacgctgcccacc
cggcgcagcgtgatggaaggctggcagtcgcagctggtgctggaggcggcgatgatcgaa
tgtggcgggtttccgccccccgtcgcggggacggtggcggaactggtatactggcgtctg
accggcgggcatgtccctgcacaggtactggacgtggcgcggggcacggaactggcggaa
ctgatcgcgggctgcaggagggggctgcgtgatctggttacggcctacgacaatcctgac
cagccttacctgtcccatcctttccccggcgaggaaccccgttttgccgattacgcccat
ctggcccgcgtggcggaatggagtgccgcgcgtgaggagaatggcgcatga
DBGET
integrated database retrieval system
