Komagataeibacter oboediens: LV478_06170
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Entry
LV478_06170 CDS
T08952
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
koi
Komagataeibacter oboediens
Brite
KEGG Orthology (KO) [BR:
koi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
koi03016
]
LV478_06170 (truB)
Enzymes [BR:
koi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
LV478_06170 (truB)
Transfer RNA biogenesis [BR:
koi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LV478_06170 (truB)
Prokaryotic type
LV478_06170 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
WEQ53105
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All DBs
Position
807430..808350
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AA seq
306 aa
AA seq
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MGRKRGRPLDGWLIVDKPSGMTSTQVVGRARYLFDAAKAGHGGTLDPLATGLLPIAFGRA
TKTVPYIMDGTKRYHFTLRIGEARDSDDAEGSVTAVSDVRPDNAAFETALAAFRGDIMQV
PPVFSALKVGGKRSYDMARAGNAPELAPRPARIDRFELIARPDADTAVFEVESGKGVYMR
ALARDIALACGTVGHVAALRRLNVGPFDESHAIPLDKIVASADNAPAPPDLLLPVATALA
DIPALALTREEADALSYGQAIDLNQLADRMPEHTDPRSGVVRAMDGARVVGLCRPVDGWL
RSVRML
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgggacgcaaacgtggacgcccgctggacggctggctgatagttgacaagccatcggga
atgacctcgacacaggtcgtgggccgtgcgcgttacctgtttgatgcggccaaggcgggc
catggcggcacgctggacccgctggcaacgggactgctgcccatcgcctttggcagggcg
acgaagaccgtgccttatataatggatggcaccaagcgctatcacttcaccctgcgcatc
ggggaagcacgggacagtgacgacgcggaaggcagcgtgaccgccgtatccgacgtgcgc
cccgacaatgccgcgttcgagaccgccctggctgcctttcggggcgatatcatgcaggtg
ccgccggtcttttccgcgctgaaggtggggggaaagcggtcctatgacatggcgcgcgcg
ggcaatgcgccggaacttgccccccgtcccgcgcggattgaccggtttgaactgatcgcg
cgccccgatgccgatacggcggtgttcgaggtggaatcgggcaagggcgtgtacatgcgc
gcgctggcccgcgatatcgcgctggcctgtggcacggtggggcatgtggccgcgttgcgg
cggctgaacgtcgggccttttgatgaatcccatgcgattccactggacaaaattgtcgca
agcgccgacaacgcgcctgctccaccggatctgctgcttccggtcgcgaccgcgctggcc
gacatcccggcgctggccctgacccgtgaggaagcggatgccctgtcatatggccaggca
atagacctgaaccagctggcggaccggatgcctgagcacaccgacccccgttcgggtgtc
gtgcgtgcgatggacggggcgcgtgtggtcggactgtgccgtcccgtggacggctggctg
cgatcagtacgcatgctgtga
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