Komagataeibacter oboediens: LV478_07940
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Entry
LV478_07940 CDS
T08952
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
koi
Komagataeibacter oboediens
Pathway
koi00300
Lysine biosynthesis
koi00470
D-Amino acid metabolism
koi01100
Metabolic pathways
koi01110
Biosynthesis of secondary metabolites
koi01120
Microbial metabolism in diverse environments
koi01230
Biosynthesis of amino acids
Module
koi_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
koi00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LV478_07940 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LV478_07940 (dapF)
Enzymes [BR:
koi01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
LV478_07940 (dapF)
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GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
WEQ53418
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Position
1186313..1187137
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AA seq
274 aa
AA seq
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MMTGFLKMHGLGNDFVVVDERVHRHDLTPARIAALCDRHTGIGCDQFVTLRPACAEGADV
FVRFFNADGSESGACGNASRCIADLVARETGQEHVGLQTRAGVLHATIIRPGLVTVDMGT
PARDWADVPLAEAMDTLHLPVAGDPAAVSMGNPHATFFLSMPDAMDPCVAGPALEHHPLF
PQRANIGFAHVTAPDAMRLRVWERGSGLTRACGSGACAAVVNAVRRGLVERTCTVEMDGG
ELTITWREGDGHVLMTGPATTSFMGTFNPEDYPR
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgatgaccgggtttctcaagatgcatgggctgggcaatgactttgtggtggtggatgaa
cgcgtccaccgccatgacctgacgcctgcccggatcgctgcattatgtgaccggcatacc
ggtattggctgcgaccagttcgtgaccctgcgccctgcctgtgcggagggggcggacgtg
ttcgtgcggttcttcaatgccgatgggtcggaatcgggggcatgcggcaatgcgtcgcgc
tgcattgccgatcttgtggcgcgtgagacgggacaggagcatgtcgggctacagacccgc
gcgggcgtgctgcacgccaccattatccgccccggcctggtcacggtggatatgggaaca
cccgcgcgggactgggcggatgtgccgctggcggaagcaatggacacgctgcacctgcca
gtcgcgggcgaccctgccgctgtgtccatgggcaacccgcatgcgacctttttcctgtcc
atgccagatgccatggacccatgcgtggcgggaccggcactggaacatcatccactgttt
ccccagcgcgccaatatcggctttgcccatgtcacggcacccgatgccatgcgcctgcgc
gtgtgggaacgcggcagcggcctgacgcgggcgtgcgggtcaggtgcgtgcgccgccgtg
gtcaacgccgtgcggcgcgggctggtggaacgcacctgcacggtggaaatggatggtggc
gaactgaccattacatggcgcgaaggcgacggccatgtgctgatgaccggccccgcgaca
accagtttcatgggcacattcaacccggaagactacccccgatga
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