Komagataeibacter oboediens: LV478_08695
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Entry
LV478_08695 CDS
T08952
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
koi
Komagataeibacter oboediens
Brite
KEGG Orthology (KO) [BR:
koi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
koi03016
]
LV478_08695
Enzymes [BR:
koi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
LV478_08695
Transfer RNA biogenesis [BR:
koi03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
LV478_08695
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
DNA_pol_B_2
Motif
Other DBs
NCBI-ProteinID:
WEQ53554
LinkDB
All DBs
Position
complement(1351978..1352625)
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AA seq
215 aa
AA seq
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MAASPAPDAIHFHRGDLPAGVTFPGAVAVDTETMGLNPHRDRLCLVQLSAGDGHAHLVQM
PRGATAADCPNLVRVLTDPQRPKLMHFARFDVAILQHTLGITVAPNICTKIASKLVRTYT
DRHGLAHLCRELLGVELSKQQQTSDWGAPDLTPEQLAYAASDVLYLHALWEKLEALLHRE
NRRELAQACYDFLPTRARLDILGYEEPDIFAHRAA
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaagcccggcccccgacgccatccatttccatcgcggcgacctgccggccggg
gtcacgtttcccggcgccgtggccgttgatacggaaacaatgggcctgaacccgcaccgg
gaccggctgtgcctggtgcagctttccgcgggagacggtcatgcccacctggtacagatg
ccgcgcggcgccacggcggcagactgccccaacctcgtgcgcgtgctgactgatccccag
cggcccaagctcatgcatttcgcccgtttcgacgttgcgatcctgcagcatacccttggc
attacggttgcgccgaacatctgcaccaagatcgcctccaagctggtgcggacctatacc
gaccgtcacggactggcccatctgtgccgcgaactgctgggtgtggaactgagcaagcag
cagcagacatctgactggggggcacctgacctgacacccgaacagctggcctatgccgcg
tccgacgtgctgtacctgcatgcgctgtgggaaaagctggaggctctgctgcaccgtgaa
aaccgccgtgaactggcgcaggcctgttacgatttccttccaacccgcgcgcgtctggat
atcctgggatacgaagaaccggatattttcgcgcatcgcgcagcctga
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