Komagataeibacter oboediens: LV478_15635
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Entry
LV478_15635 CDS
T08952
Name
(GenBank) TlyA family RNA methyltransferase
KO
K06442
23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:
2.1.1.226
2.1.1.227
]
Organism
koi
Komagataeibacter oboediens
Brite
KEGG Orthology (KO) [BR:
koi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
koi03009
]
LV478_15635
Enzymes [BR:
koi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.226 23S rRNA (cytidine1920-2'-O)-methyltransferase
LV478_15635
2.1.1.227 16S rRNA (cytidine1409-2'-O)-methyltransferase
LV478_15635
Ribosome biogenesis [BR:
koi03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
LV478_15635
23S rRNA modification factors
LV478_15635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
S4
Methyltransf_11
Methyltransf_25
Methyltransf_12
Methyltransf_23
Motif
Other DBs
NCBI-ProteinID:
WEQ51916
LinkDB
All DBs
Position
complement(2884047..2884790)
Genome browser
AA seq
247 aa
AA seq
DB search
MAKRRVDQMLVDRGLVETRTRAQALIMAGLVHTPDRRIAKAGEQIPEDTPLTLKGQDHPW
VSRGGIKLAHGLEHFGLSPAGLTCLDVGASTGGFTDVLLHEGAAKVYAVDVGHGQLAWKL
RSNTEQVVVLEKCNARTLDTTIIPDPIQALVCDASFIGLRTVLPAGLELCVPGAWAIALI
KPQFEAGRDAVGAKGVVRDPAVHDAVCAMIHEWWSGLPGWTVLGIDPSPITGPEGNREFL
IAARKDG
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaacgtcgcgttgaccagatgctggtggaccgggggctggtggaaacccgcacc
cgggcgcaggcactgatcatggccggtctggtccacacgcccgaccggcgcattgccaag
gccggagagcagatccccgaggatacgcccctgacgctgaaggggcaggaccatccatgg
gtctcgcgcggcgggataaagctggcgcacgggctggaacatttcggcctgtcgcctgcg
ggcctaacctgtcttgatgtcggcgcgtcaaccggcggctttaccgatgtgctgctgcat
gaaggggcggcgaaggtctatgccgtcgatgtcggccatgggcaactggcatggaaactg
cgcagcaacaccgaacaggttgttgtgctggaaaaatgcaatgcccgtacactggacacc
accatcattcccgacccgatacaggcgctggtctgtgacgccagcttcattggcctgcgc
accgtcctgcccgcggggctggaactgtgcgtaccgggtgcgtgggccattgcgctgatc
aagccgcagttcgaagcaggacgggatgcggtcggcgcaaagggcgtcgtgcgcgacccg
gcggtgcatgacgccgtatgcgccatgatccatgaatggtggtcgggcctgcctggctgg
accgtactgggcattgaccccagtcccatcaccgggccggaaggcaaccgggaatttctg
atcgcggcgcgtaaggacggctga
DBGET
integrated database retrieval system
