Komagataeibacter oboediens: LV478_16510
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Entry
LV478_16510 CDS
T08952
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
koi
Komagataeibacter oboediens
Brite
KEGG Orthology (KO) [BR:
koi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
koi03032
]
LV478_16510
03036 Chromosome and associated proteins [BR:
koi03036
]
LV478_16510
03400 DNA repair and recombination proteins [BR:
koi03400
]
LV478_16510
DNA replication proteins [BR:
koi03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
LV478_16510
Chromosome and associated proteins [BR:
koi03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
LV478_16510
DNA repair and recombination proteins [BR:
koi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
LV478_16510
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_euk_2
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
WEQ52068
LinkDB
All DBs
Position
complement(3059955..3060251)
Genome browser
AA seq
98 aa
AA seq
DB search
MTRSELIAELAAARPHLPIREVERIVQVIFAEVSNALMRGDRVELRGFGAFTVKKRDART
GRNPRTGETVSVEEKVVPFFKAGNELRERVNRSHQTVD
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atgaccagatcggaattgattgccgaacttgccgctgcccgtccacatctgccgatacgg
gaagtggaacgtattgttcaggtcatctttgcggaagtcagcaatgcgctgatgcggggg
gaccgggtggaactgcgtggctttggcgcgtttacggtcaagaaacgtgacgcccgcacg
ggacggaatccccgcacgggcgaaaccgtgtcggtggaggaaaaggtcgtgccatttttc
aaggcgggaaatgaattgcgcgaacgcgtcaaccgctcccaccagacggtcgactga
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