Komagataeibacter oboediens: LV478_18200
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Entry
LV478_18200 CDS
T08952
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
koi
Komagataeibacter oboediens
Pathway
koi03030
DNA replication
koi03430
Mismatch repair
koi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
koi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LV478_18200
03430 Mismatch repair
LV478_18200
03440 Homologous recombination
LV478_18200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
koi03032
]
LV478_18200
03400 DNA repair and recombination proteins [BR:
koi03400
]
LV478_18200
Enzymes [BR:
koi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LV478_18200
DNA replication proteins [BR:
koi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LV478_18200
DNA repair and recombination proteins [BR:
koi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LV478_18200
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DNA_pol3_delta2
DUF3646
DNAX_ATPase_lid
AAA
AAA_22
AAA_30
RuvB_N
AAA_5
AAA_14
AAA_19
AAA_16
DUF815
TIP49
AAA_18
AAA_assoc_2
Mg_chelatase
DEAD
nSTAND3
TsaE
SRP54
EspB_PPE
Motif
Other DBs
NCBI-ProteinID:
WEQ52380
LinkDB
All DBs
Position
complement(3420996..3423011)
Genome browser
AA seq
671 aa
AA seq
DB search
MTVPSDQDRSEEAGLPAPPADGPGLFGDAPQPPAPAMQDVAPAAPYRVLARKYRPTTFDD
LIGQETTVRILRNAFALGRVAHAFMLTGVRGVGKTTTARIIARALNCTGPDGRGGPTADP
CGVCPNCVAILADRHPDVLEMDAASRTGVDDVREIIEATRFRPMQGRMKVFIIDEVHMLS
RNAFNALLKTLEEPPAQVTFIFATTELRKVPVTVLSRCQTFALRRVPQVELAAHFDRVAQ
AEHVRFSPDALSLIARAADGSVRDGLSLLDQAIAQGTLDGEGGTDAAPIGVDLVAGMLGL
ADRGLVFDLLDAVLEGKPDRALAITADVYVRGGDLGVMLGDVLELVHTVSRIKAIPALRD
NPELPEAERQRGAALAERVPVPVLGRTWQMLLKGLAEVEQAPDRRQAAEMVLIRLCYVAD
LPPPGDLVRKMLGQDAETAPLHVPEPAGGDNSASGPAVSAPPVAGGPPVGGDGGAIRMVA
NGGMRVEGTPRPAAPRTGRVEETAPAPEPLAPPRTWRETVAFVSGRDAMLHGHLRHATHL
VSFAPPLIEIRVERNSLPGLARRLETILREGTGDPAWQVRLSEAEGEATLAEQGAEIIQL
HRAAAQAHPLVQAAMQVFPTARLGEVTDHALDDYGLPPEEMAVQNLAPDLEFAPLDADLV
EEDDLDADDFA
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtcccgtcggatcaggatcgttccgaggaggccgggctgcctgcgccgcccgca
gacggccccggactttttggtgacgcaccgcagccgcccgcaccggccatgcaggatgtc
gcccctgccgcgccctaccgggtactggcccggaaatatcgccccaccacctttgatgac
ctgatcggacaggaaaccaccgtccgaatcctgcgcaacgcctttgcgctggggcgtgtc
gcgcatgcgttcatgctgacgggcgtgcgcggcgtgggcaagaccaccacggcgcggatc
atcgcgcgtgccctgaactgcaccgggccggatggcaggggcggccccacggccgacccg
tgcggtgtctgccccaactgtgtcgccatcctggcggaccggcaccccgatgtgctggaa
atggatgccgcgtcgcgcaccggtgtcgatgacgtgcgcgagattatcgaagccacccga
ttccgtcccatgcagggacgcatgaaggtgttcatcatcgatgaagtgcacatgctttcg
cgcaatgcgttcaatgcattgctcaagacgctggaggaaccgcccgcacaggtcaccttc
attttcgcgaccaccgaactgcgcaaggtgccggtcaccgtcctgtcacgctgccagacc
tttgccctgcgccgtgtgccgcaggtggaactggccgcacatttcgaccgcgtggcgcag
gccgaacatgtccgcttttctcccgatgccctgtcactcatcgcgcgggctgcggacggg
tcggtgcgtgacgggctgtcgctgctggatcaggccattgcccagggcacgctggatggg
gaaggcggcacggatgcagcccccattggcgtggatcttgttgcgggcatgctggggctg
gcggatcgcggactggtgtttgacctgctggatgcggtgctggagggaaaacccgaccgg
gcgctggccattacggcggatgtttatgtgcgtggcggtgacctgggcgtgatgctgggg
gatgtgctggaactggtccacacggtgtcgcgcatcaaggcgattccggcgctgcgcgac
aaccccgaactgcccgaagctgaacgccagcggggtgctgccctggctgaacgtgtgccc
gtgccggtgctggggcggacatggcagatgctgctcaagggcctggcagaagtggaacag
gcccctgatcgcaggcaggccgccgaaatggtgctgatccgcctgtgttacgtggccgac
ctgccgccgccgggtgatcttgtgcgcaagatgctggggcaggatgcggagacggccccc
ctgcacgtgccggagcctgcgggtggggacaacagcgcgtccggcccagcggtttccgcg
ccgcccgtggccggtggcccgcccgtcgggggcgatggtggcgcgatccgcatggtggcc
aatggcggcatgcgggttgagggcacgccacgtcccgcagcaccccggaccggcagggtc
gaggaaaccgctcccgcgccggaaccgctcgccccgccgcggacatggcgcgagaccgtg
gcattcgtttctggccgtgacgccatgctgcatggtcacctgcggcatgcgacgcatctg
gtgtcctttgccccgcccctgatcgagatccgtgtcgagcgcaacagcctgccgggtctg
gcccggcggctggaaaccatactgcgcgaaggcacaggcgatcccgcatggcaggtccgc
ctgtcggaggcagaaggggaggcgaccctggccgaacagggggcggagatcatccagctt
caccgtgcggcggcacaggcccacccgctggtgcaggccgcgatgcaggttttccccacg
gcccgccttggtgaggtcacggaccatgcgcttgatgattacggcctgcccccggaagaa
atggcggtccagaatttggctccggatctcgaattcgcgcctcttgatgccgatctggta
gaagaggacgatctggatgcagatgattttgcctga
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integrated database retrieval system
