KEGG   Komagataeibacter oboediens: LV478_18570
Entry
LV478_18570       CDS       T08952                                 
Name
(GenBank) HsdR family type I site-specific deoxyribonuclease
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
koi  Komagataeibacter oboediens
Brite
KEGG Orthology (KO) [BR:koi00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:koi02048]
    LV478_18570
Enzymes [BR:koi01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     LV478_18570
Prokaryotic defense system [BR:koi02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   LV478_18570
SSDB
Motif
Pfam: SWI2_SNF2 HSDR_N T1R_D3-like ResIII Fe_dep_repr_C
Other DBs
NCBI-ProteinID: WEQ54135
LinkDB
Position
pKOB3:complement(4640..7942)
AA seq 1100 aa
MAATPKFQEEFSAKLPALALLSTLGWRFLPPSEALILRSGKQDAVVLDTLLRAELKKRRF
NFEGLEHALSDQAIERLISIVTHPDFVSGLRDANDKMTTHLLFGIVAHERINGRKANPTI
ALIDWQNPQNNSFTFTEEFSVLRSTDLTQTRRPDIVCFVNGIPLAVIEAKRPDGQPGKGP
TVAAGISQTIRNQLKDEIPQLFAYSQLLLSINGHDGRYGTCGTPKKFWASWKEEDITESR
MHNLKNTSLSPAQTDALFAERKPSDRAWFEDWASRPLAVTDQDRLLIGLLSPERLLEMTR
FFTLVDRKNGKIVARYQQVFGIRRLLERIKTRRADGGREGGVIWHTTGSGKSFTMVFLSR
ALILDDDLKQCRILVVTDRKDLERQLSTTFSTGGELADKKDKAAALATSGRRLAQQIGHG
QERIIFSLINKFHTATGYPECHNDSPDIIVLVDEGHRSQGGENHARMKHALPNAAFIAFT
GTPLLKGSETTSRFGKIIHSYTMQQAVSDGTVTPLLYEERKPDLNVNDEAIDAWFDRITQ
GLTEEQVTDLKKRFARANQVYKADDRIRLIAMDLATHFDSNIDEGLKGMLACDSKLSAIR
YKQYLDEVGLFESAIVMSPPDTREGHSEVDEAKQPEVQKWWAETVGKQSEDDYTRGVIER
FEKDPDLKLIIVVDKLLTGFDEPKNAVLYIDKPLKQHNLLQAIARVNRLHDQKKHGLLID
YRGILAELDTTLARYDQLAADNVGGYDPKDIAGLYSQMSTEYRELPALHKALWAIFDGVK
NRSDPQQLRAVLMPRMVEEHGQMVDVNLKRRDDFYEALTKFSACLKVALQSVAFFEDTSF
TEKDRNTYKETLKQMTSLRQWILHDTGETVDFDQYAEQVKKLLDRHVAGVKVHESEGLYA
VGKMGQKPDDEQPEDWTEDKTRNETDLIRTRVTKMITHDMQDDPYAKEAFSALLRQVIEE
AERLFDHPLKQFMLFQEFEEQVAQRKLKDIPSAFEGHRHAQAYYGMFLQTLTTIFNHKQT
DEEQQRWIDLAFEIDRIVDRAVRENSLSQSDMEKTIHQELLPLLFAIGQKAGFGVNQAQK
IITQVIQIMRAGPAPGEQPA
NT seq 3303 nt   +upstreamnt  +downstreamnt
atggccgccaccccgaaatttcaggaagaattcagcgccaaactccccgccctggcgctg
ctcagcaccctcggctggcggttcctgccgccatctgaggcgctgatcctgcggagcggc
aaacaggacgcggtggtgcttgacacgttgttgcgggcggaactgaaaaagcgccgcttc
aattttgaaggactagagcacgccctgtccgatcaggcgatcgaacggctcatctccatc
gtcacgcacccggacttcgtctctggcctgcgtgacgccaatgataagatgaccacccat
ctgctgttcggcattgttgcccatgaacgcatcaacgggcgcaaggccaacccgaccatt
gccctgatcgactggcagaacccgcaaaacaacagcttcaccttcaccgaagaattcagc
gtcctgcgcagcacggacctgacccagacgcgccgaccggacattgtctgcttcgtcaat
ggcattccgctggcggtgatcgaggccaagcgccccgatggccagccgggcaagggcccg
accgtggccgccggcatttcccagaccatccgcaaccagctcaaggacgaaatcccgcag
ctttttgcctacagccagctcctgctctccatcaacgggcatgacggacgctatggcacc
tgcggtacgcccaagaagttctgggcaagctggaaagaggaggacatcaccgaaagccgg
atgcataacctcaagaacacatctctctcccccgcccagaccgacgcgctatttgccgaa
cgcaagccgtccgatcgtgcgtggtttgaggactgggcatcccgcccgctggcggttacg
gatcaggaccggctactgatcggcctgctctcccccgaacgccttctggaaatgacacgg
ttcttcacgctggtggaccgcaagaacggcaagatcgttgcccgctaccagcaggtcttc
ggcatcaggcgcctgctggagcgcatcaagacccgccgggcagatggcgggcgcgaaggc
ggcgtgatctggcacaccactggatcgggaaagtcctttaccatggtgttcctcagccgg
gcgctgatccttgatgatgacctgaagcaatgccgcattctggtggtcaccgaccgcaag
gacctggaacgccagcttagcaccactttttccaccggtggcgaactggcggacaagaag
gacaaggccgcagccctggccacgtccggccgccgcctggcgcagcagatcgggcatggg
caggagcggatcatcttctcgctcatcaacaaattccacaccgccacgggctaccctgaa
tgtcataatgacagcccggatatcatcgtgctggtcgatgaaggccaccgcagccagggc
ggggaaaaccatgcccgcatgaagcatgccctgcccaatgccgctttcattgcctttacc
ggcacgccactgctcaagggtagcgagacgaccagccggttcgggaagatcatccattcc
tacaccatgcagcaggctgtctcggacggaacggtgacgccgctgctctatgaagaacgc
aagcctgatctcaacgtcaatgatgaggccattgatgcatggtttgaccgcattacgcag
ggcctgacggaagagcaggtcacagacctcaagaaacgcttcgcccgtgccaatcaggtc
tacaaggccgatgaccgtatccggctgatcgccatggacctggccacgcattttgacagc
aacattgatgagggcctgaagggtatgctggcctgtgacagcaagctctcggccatccgc
tacaagcagtatctggacgaagtggggctgtttgaaagcgccatcgtcatgagcccacct
gacacgcgggaaggacattcggaagtcgatgaagccaaacagcccgaagtgcagaaatgg
tgggccgagactgtcggcaagcagagcgaggatgactatacgcggggcgtgatcgagcgc
tttgaaaaggatcctgacctgaagctgatcattgtggtggacaagctgctgaccgggttt
gacgagccgaaaaacgccgtgctgtatatcgacaagccgttgaaacagcacaacctgctg
caggccattgcccgcgtgaaccggctgcatgaccagaaaaagcatgggctgctgatcgac
tatcgcggcattctggcggagctggacacgacacttgcgcgctatgaccaactcgcggcc
gataatgtcggtggatatgaccccaaggacattgccgggctgtatagccagatgagcacc
gaataccgcgaactcccggcgctgcataaggcgctgtgggccatctttgacggcgtgaag
aacagaagcgatccccagcagcttcgcgccgtgctcatgccgcgtatggtggaagagcac
ggccagatggtggatgtgaacctcaagcgccgcgatgatttctatgaggctctgacgaag
ttctctgcctgcctcaaggtggccctgcagtcggtcgcattcttcgaggataccagcttc
accgaaaaagaccgcaacacctacaaggaaaccctgaagcagatgaccagcctgcgccag
tggatcctgcatgataccggcgaaaccgtggactttgaccagtatgccgagcaggtgaaa
aagctgctggaccggcatgtggcgggcgtaaaggtgcatgaatctgaagggctgtatgcc
gtcggcaagatgggccagaaaccagatgacgagcagcccgaggactggaccgaggacaag
acccgcaacgaaacggacctgatccgcacgcgcgtgacgaaaatgatcacccatgacatg
caggacgatccttatgccaaggaggcgttctccgccctgttgcgtcaggtgattgaagag
gcggagcgcctgttcgatcacccgctcaagcagtttatgctgttccaggaattcgaggag
caggttgcgcaacggaaactgaaggacattccatccgccttcgaaggccaccggcatgcc
caggcctattatggcatgttcctgcagacgctgacgaccatcttcaatcacaagcagacc
gatgaagagcagcagcgctggatcgatctggcgttcgagattgaccggattgtggacagg
gccgtacgggagaactcgctcagccagagcgacatggaaaagaccattcaccaggaattg
ctacccctccttttcgccatcggccaaaaagccggttttggcgtaaatcaggcgcaaaag
atcatcacgcaggtcatccagatcatgcgggccggtccggcacccggggaacagccagcc
tga

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