KEGG   Klebsiella oxytoca KONIH1: KONIH1_00980
Entry
KONIH1_00980      CDS       T03269                                 
Name
(GenBank) ATP-dependent RNA helicase RhlB
  KO
K03732  ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
Organism
kok  Klebsiella oxytoca KONIH1
Pathway
kok03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:kok00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    KONIH1_00980
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:kok03019]
    KONIH1_00980
Enzymes [BR:kok01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     KONIH1_00980
Messenger RNA biogenesis [BR:kok03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     KONIH1_00980
SSDB
Motif
Pfam: DEAD Helicase_C ResIII ERCC3_RAD25_C CCDC138_C AAA_22
Other DBs
NCBI-ProteinID: AID87686
LinkDB
Position
complement(193328..194593)
AA seq 421 aa
MSKTHLTEQKFSDFALHPAVIEALEKKGFHNCTPIQALALPLTLEGRDVAGQAQTGTGKT
MAFLTSTFHYLLTHPAIADRQVNQPRALIMAPTRELAVQIHADAEPLAQATGLKLGLAYG
GDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIR
WLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYVEVEPEQKTGHRIKEELFYPSN
EEKMRLLQTLLEEEWPDRAIIFANTKHRCEDIWGHLAADGHRVGLLTGDVAQKKRLRILD
EFTRGDIDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLA
CEEYALNLPAIETYIGHSIPVSKYNSDALMTELPRPLRLTRPRPGNGPRRNGPPRNRRRS
G
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgagcaaaacacatttaacagaacagaagttttccgacttcgccctgcacccggcagtg
attgaagcccttgaaaagaaagggtttcataattgtacacccattcaggcactcgccctc
ccgcttacgctggaaggtcgcgatgtcgccgggcaggcgcaaaccggtaccggtaaaacg
atggcgtttctgacgtcaacgtttcattatcttctcactcacccggcgatcgctgaccgc
caggtcaaccagccgcgcgcgctgatcatggcgccgacgcgtgaactggcggttcagatc
cacgctgacgccgaaccgctggcgcaggctaccggtctgaaactcggcctggcttacggc
ggcgacggctacgataagcagctgaaagtgctggaaagcggcgtggatattctgatcggt
accaccggtcgccttatcgattacgccaaacagaaccatattaacctcggcgccattcag
gttgtcgtgcttgacgaagccgatcgcatgtacgatctcggctttattaaagatatccgc
tggctgttccgccgtatgccgccagcgaatcagcgcctgaacatgctgttctctgccacc
ctttcttatcgcgtccgtgaactggcgttcgaacaaatgaacaacgccgagtacgtcgaa
gttgagcctgagcagaaaacgggccaccgtattaaagaagagctgttctatccttccaac
gaagaaaaaatgcgcctgctgcagacgctgctggaagaagagtggccggatcgcgcgatt
attttcgccaacaccaaacatcgttgtgaagatatctggggtcacctggcggcggacggc
catcgcgttggtctgttaaccggcgacgttgcgcagaaaaaacgcctgcgcattctcgat
gaatttacccgcggcgatatcgacattctggtcgcaaccgacgttgccgcccgcggtctg
catattccggccgttacgcacgtctttaactacgacctgccggacgattgcgaagactac
gttcaccgtattggccgtaccggccgcgctggcgccagcggtcactccatcagcctggcc
tgtgaagagtacgcgctgaatctgccggcaattgaaacctatatcggtcattcaattccg
gtcagcaaatacaattcggacgcgctgatgactgaactgcccagaccgctacgtcttacg
cgcccgcgcccgggcaacggcccgcgtcgtaacggtccgccacgtaatcgtcgtcgttca
ggttaa

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