Klebsiella oxytoca KONIH1: KONIH1_04980
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Entry
KONIH1_04980 CDS
T03269
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
kok
Klebsiella oxytoca KONIH1
Brite
KEGG Orthology (KO) [BR:
kok00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kok03016
]
KONIH1_04980
Enzymes [BR:
kok01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
KONIH1_04980
Transfer RNA biogenesis [BR:
kok03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
KONIH1_04980
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
AID88438
LinkDB
All DBs
Position
complement(1054549..1055085)
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AA seq
178 aa
AA seq
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MSKPKRLFFAIELPGDVQQQIVHWRAASFPGDAGRPVAAANLHLTLAFLGEVSADKQRAL
SAMAGRIRQPGFTLTLDDAGQWLRSRVVWLGTRQPPRGVLQLANMLRAQAARSGCYQSPQ
PFHPHITLLRDARHAVPIPPPGFSWAFAVNEFVLYESSFSRGRTRYQALERYPFDKES
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagccgaaaaggctgtttttcgccattgaactacccggggacgttcagcagcag
atcgtgcactggcgcgccgccagctttcccggcgatgcggggcgaccggtggcggcggct
aacctccatctgacgctggcgtttcttggcgaggtgagcgcggacaagcagcgggcgctg
tcagcgatggccggacggatccgccagccgggctttaccctgacgcttgacgatgccggg
cagtggctgcgttcgcgggtggtgtggctgggcacccgtcagccgccgcgcggggtgctg
caattagcgaatatgctgcgcgcccaggccgcccgcagcggctgctatcagagcccgcag
ccgtttcatccgcatataaccctgctgcgcgacgcgcgccacgcggtgccgattccgccg
cccggatttagctgggcgtttgcggtcaacgaatttgtgctctacgaatccagctttagc
cgcgggcgcacccgctatcaggcgctggaacgttatcccttcgacaaggaaagctga
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