Klebsiella oxytoca KONIH1: KONIH1_12260
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Entry
KONIH1_12260 CDS
T03269
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
kok
Klebsiella oxytoca KONIH1
Brite
KEGG Orthology (KO) [BR:
kok00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kok03016
]
KONIH1_12260
Enzymes [BR:
kok01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
KONIH1_12260
Transfer RNA biogenesis [BR:
kok03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
KONIH1_12260
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
PilZ
OSR1_C
ODP
Motif
Other DBs
NCBI-ProteinID:
AID89814
LinkDB
All DBs
Position
complement(2598044..2599978)
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AA seq
644 aa
AA seq
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MFQDNPLLAQLKQQLHSQTPRVEGVVKGTEKGFGFLEVDSQKSYFIPPPQMKKVMHGDRI
IAVVNTEKERESAEPEELVEPFLTRFVGKVHKKDDRLSIVPDHPLLKDAIPCRAARGVEH
DFKEGDWAVAEMRRHPLKGDRGFYAELTQYITYGDDHFVPWWVTLARHNLEKEAPDGVAT
EMLDEGLERRDLTALAFVTIDSASTEDMDDALYVEQTADGKLHLTVAIADPTAWIAEGSK
LDNAAKIRAFTNYLPGFNIPMLPRELSDDLCSLRPNEVRPVLACRMILADDGAIEDDIQF
FAATIESKAKLAYDDVSDWLENNGGWQPGSETIAQQIKLLQDACLRRSEWRKNHALVFKD
RPDYRFVLGDKGEVLDIVAEPRRIANRIVEESMIAANICAARVLRDKLGFGVYNVHTGFD
PANTEQLAALLKTHDVHVDPVEVLTLEGFCKLRRELDAQPSGFLDSRIRRFQSFAEISTE
PGPHFGLGLEAYATWTSPIRKYGDMINHRLLKAIIKGEAISRPQDDVAIQMAERRRLNRM
AERDVGDWLYARYLNPQAGTTTRFAAEIIDVSRGGMRVRLVDNGAVAFIPAPFLHAVRDE
LVCSQENGTVQIKGEVVYKVTDVIDVTIAEVRMETRSVIARPAA
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaggacaacccgctgctagcgcagcttaaacagcaactgcattcccagactccg
cgcgtagaaggggtcgttaaggggacggaaaaaggatttggcttcctcgaagtcgactcg
cagaaaagctatttcattccgccgccgcaaatgaaaaaagtgatgcatggcgatcgtatt
atcgccgtggtcaatactgaaaaggaacgcgaaagcgctgagcctgaagaactggttgag
ccgttcctgacgcgttttgtcggcaaagttcataagaaagacgatcgtctttccatcgtt
cctgaccatccgctgctgaaagatgccattccttgccgcgccgcgcgcggcgtagagcat
gattttaaagagggtgactgggccgttgccgaaatgcgccgtcatccgctgaaaggcgac
cgcggtttctacgctgagctcacccagtacattacctacggcgacgatcatttcgttcca
tggtgggtcaccctggcgcgtcataatctggaaaaagaagcgccggacggcgtggcgacc
gagatgcttgatgaaggtctggaacgccgtgatttaacggccctggctttcgtgaccatc
gacagcgccagcaccgaagatatggacgatgcgctgtacgttgagcaaaccgctgacggc
aagctgcatctgaccgtcgctatcgccgatccgaccgcgtggattgccgaaggcagcaag
ctggacaacgcggcgaaaattcgcgcctttaccaactatctgccgggcttcaacattccg
atgctgccgcgcgagctctcggacgacctctgctctctgcgccccaacgaggttcgcccg
gttctggcctgccgcatgatcctcgcggatgacggcgccatcgaagatgatattcagttc
ttcgcggcgaccatcgagtcgaaagcgaagctggcctacgatgatgtttccgactggctg
gaaaataacggtggctggcagccgggaagcgagactatcgcccagcaaattaagctgctg
caggacgcctgcctgcgtcgtagcgaatggcgtaaaaaccacgcgctggtattcaaggac
cgcccggattaccgctttgtgcttggcgacaagggtgaagtgctggatatcgtcgccgaa
ccgcgtcgtatcgccaaccgcatcgttgaagagtcaatgattgccgccaacatctgtgcc
gcccgcgtgctgcgcgacaaactcggtttcggcgtttataacgtccataccggtttcgat
ccggccaacaccgagcagctcgcggccttactgaagactcacgatgtgcacgttgacccg
gtggaagtgctgacgctggaaggcttctgcaagctgcgtcgcgagctggacgcgcagccg
tctggtttcctcgatagccgtattcgtcgcttccagtcgtttgcggaaatcagcaccgag
ccgggcccgcacttcggcctgggccttgaggcctatgcgacctggacttccccgatccgt
aagtacggcgatatgattaaccatcgtctgctgaaagcgattatcaaaggggaagcgatc
tcccgcccgcaggatgacgttgcgatccaaatggctgaacgccgtcgcctcaaccgcatg
gcggagcgcgatgttggagactggctgtacgcccgctatctgaatccgcaggccggcacc
actacccgttttgcagctgagattatcgatgtcagccgcggcggcatgcgcgtgcgtctg
gttgataacggcgcggttgcctttatcccggcgccgttccttcacgccgtgcgcgatgaa
ctggtgtgcagccaggaaaacggcaccgtgcagatcaaaggcgaagtcgtctacaaagtc
acggatgttatcgacgtcacgattgccgaagtgcgcatggaaacccgtagcgtgattgcg
cgtccagccgcctga
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