Klebsiella oxytoca KONIH1: KONIH1_21790
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Entry
KONIH1_21790 CDS
T03269
Name
(GenBank) ATP-dependent RNA helicase SrmB
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
kok
Klebsiella oxytoca KONIH1
Brite
KEGG Orthology (KO) [BR:
kok00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
kok03009
]
KONIH1_21790
Enzymes [BR:
kok01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KONIH1_21790
Ribosome biogenesis [BR:
kok03009
]
Prokaryotic type
rRNA helicases
KONIH1_21790
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AID91621
LinkDB
All DBs
Position
4584799..4586130
Genome browser
AA seq
443 aa
AA seq
DB search
MTVTTFSELELDENLLDALQDKGFTRPTAIQAAAIPPALDGRDILGSAPTGTGKTAAYLL
PALQHLLDFPRKKSGPPRILILTPTRELAMQVADHARELAKHTHLDIATITGGVAYMNHA
EVFSENQDIVVATTGRLLQYIKEENFDCRAVETLILDEADRMLDMGFAQDIEHIAGETRW
RKQTMLFSATLEGDAIKDFAERLLEEPVEVSATPSTRERKKIHQWYYRADDIKHKTALLV
HLLKQPEATRSIVFVRKRERVHELAGWLREAGINTCWLEGEMVQAKRNEAISRLTDGRIN
VLIATDVAARGIDIADVSHVFNFDLPRTADIYLHRIGRTGRAGKKGTAISLVEAHDHLLL
GKIGRYIEEPLKARVIDELRPTTRAPSEKQTGKPSKKVLAKRAEKKEKEKEKPRVKKRHR
DTKNIGKRRKPSAADAPQKSNEE
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgactgtaacgactttttccgaacttgaactcgacgaaaacctgctggacgccctccag
gataaaggtttcacacgcccgacagccattcaggccgccgctattccgcctgcgcttgat
ggccgtgatattctcggttcagccccgaccggcaccggtaaaacggcggcgtatctcctg
ccagcgttgcagcatctgctcgattttccgcgcaagaagtctggtccgccgcgcattctt
atcctgacccccacgcgcgaactggcgatgcaggttgccgaccatgcgcgtgagctggca
aaacatactcatctggatatcgccacgatcaccggcggtgtcgcctatatgaaccatgcc
gaagtgttcagcgagaaccaggacatcgtggtcgccacgaccggtcgcctgctgcaatat
attaaagaagaaaactttgattgccgcgccgttgaaacgctgatccttgatgaagcggac
cgcatgctggacatgggcttcgcgcaggatatcgaacacattgccggtgaaacccgctgg
cgtaagcagaccatgctgttctccgccaccctcgaaggtgacgccattaaagattttgct
gagcgtctgctggaagaaccggtggaagtctctgcgaccccctccacccgcgagcgtaaa
aagattcaccagtggtattaccgcgccgatgacatcaagcataagaccgctctgctggtc
catctgctaaagcagccggaagcgacgcgttctatcgtcttcgtccgtaagcgcgagcgc
gtgcatgagctggcgggctggctgcgtgaagcgggtatcaacacctgctggctggaaggc
gagatggtgcaggcaaaacgtaatgaagcgattagccgtctgaccgatggccgtattaac
gtgttaatcgccaccgacgttgccgcgcgcgggatcgacatcgcggacgtcagtcacgtt
ttcaacttcgacttgccgcgcacggccgacatctatctgcaccgtatcggtcgtaccgga
cgcgcgggtaaaaagggaacggccatctctctggtcgaagcccacgaccatctgctgctg
ggtaaaattggccgctatattgaagagccgttaaaagcccgcgtcatcgatgaactgcgc
ccgaccactcgcgcacccagcgagaagcaaaccggtaaaccttccaagaaggttttagcc
aagcgtgcagagaagaaagagaaagaaaaagagaaaccgcgcgtgaaaaaacgccatcgc
gataccaaaaacattggtaagcgtcgtaaaccaagcgcagcggatgctccgcagaagtca
aacgaagagtaa
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