Klebsiella oxytoca KONIH1: KONIH1_23445
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Entry
KONIH1_23445 CDS
T03269
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
kok
Klebsiella oxytoca KONIH1
Brite
KEGG Orthology (KO) [BR:
kok00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kok03016
]
KONIH1_23445 (truD)
Enzymes [BR:
kok01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
KONIH1_23445 (truD)
Transfer RNA biogenesis [BR:
kok03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
KONIH1_23445 (truD)
Prokaryotic type
KONIH1_23445 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AID91933
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All DBs
Position
complement(4907740..4908789)
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AA seq
349 aa
AA seq
DB search
MIAFDELTYLHGKPLSQGLLKANPEDFVVVEDLGFAPDGEGEHVLVRILKNGCNTRFVAD
ALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDLSKFQLEGCQVLEYARHKRK
LRLGALKGNQFTLVLREISDRDDVETRLQAIAEHGVPNYFGAQRFGIGGSNLLGALRWAE
SGAPVRDRNKRSFWLSAARSALFNQQVGIRLKKPEFNQVVDGDALQLAGRGSWFVAASEE
LTELQARVDNRELMITAALVGSGDWGSQRDALAAEQAAVVEETQLQALLVREKVEAARRA
MLLYPQQMSWNWWDDVTVELRFWLPAGSFATSVVRELINTTGDYANIAE
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgatcgcttttgacgaactcacttatctgcatggaaaaccgctgagccaggggctgcta
aaagccaacccggaggacttcgtggtggttgaggatctcggctttgcgcctgatggcgaa
ggcgagcatgtgctggtgcgtattctgaaaaacggctgtaatacccgttttgttgctgac
gcgctggcaaaattccttaaaattcatgcgcgtgaagtgagctttgccgggcagaaggac
aaacacgcggtcactgaacagtggctgtgcgcccgagtgccgggcaaagagatgcccgac
ctgagcaaatttcagcttgagggctgtcaggtactggagtacgcgcgccataagcgcaag
ctgcgcctcggggcgctgaaggggaaccagtttactctggtgctgcgcgaaatcagcgat
cgcgacgatgtcgaaacgcgtttacaggcgattgctgagcatggcgtacccaactatttt
ggcgctcagcgcttcggtatcggcggcagtaacctgctgggggcgctgcgctgggccgag
agcggcgcgccggtgcgcgatcgtaataaacgcagtttttggttgtcggcggcccgcagc
gcattgtttaatcaacaggttggtattagattaaaaaaaccggaatttaatcaggttgtt
gatggcgatgcgctacaattagcggggcgcggaagctggttcgttgcggcctctgaagaa
ctgacggaactccaggcgcgggtagataaccgcgagctgatgattaccgctgcgcttgtg
ggcagcggcgattggggaagccaacgggatgcgctggccgccgagcaggcggcagtggtc
gaagagacgcagctacaggcgctgctggtgcgtgaaaaagtagaggccgcccgccgggcg
atgctgctttatccccagcagatgagctggaactggtgggatgacgttaccgttgaactg
cgtttctggctgcccgcgggcagcttcgccaccagcgtagtaagggagcttatcaataca
acgggtgactatgcgaatattgctgagtaa
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