Klebsiella oxytoca KONIH1: KONIH1_24005
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Entry
KONIH1_24005 CDS
T03269
Symbol
recD
Name
(GenBank) exonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
kok
Klebsiella oxytoca KONIH1
Pathway
kok03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kok00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KONIH1_24005 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kok03400
]
KONIH1_24005 (recD)
Enzymes [BR:
kok01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
KONIH1_24005 (recD)
DNA repair and recombination proteins [BR:
kok03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KONIH1_24005 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecD_N
AAA_19
AAA_30
Helicase_RecD
UvrD_C_2
Viral_helicase1
SH3_13
AAA_11
AAA_22
UvrD-helicase
SLFN-g3_helicase
AAA_16
nSTAND3
T2SSE
AAA_28
UvrD_C
MukB
PhoH
SRP54
AAA
CbiA
ATPase
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
AID92040
LinkDB
All DBs
Position
complement(5021911..5023746)
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AA seq
611 aa
AA seq
DB search
MTMDELLLQAVEQRLLRPLDVQFALMVAQEAHPAVKLTAAILSRDAGEGHVCLPISRLAE
DELLSAKAAGLSEQILELTGAPDGWLPLLNDAEAVSGGERPTPMILCGERLYLNRMWRNE
LTVARFFNEANQVLEVDEARLASTLDALFPPAEETDWQKVAAAVALTRRISVISGGPGTG
KTTTVAKLLAALIQTFSSPRCRIRLAAPTGKAAARLTESLGAALRRLPLSDQQKALVPTE
ASTLHRLLGAQPGSQRMRYHAGNPLHLDVLVVDEASMIDLPMMSRLIDALPEHGRVIFLG
DRDQLASVEAGAVLGDICAWVNAGYTPARAAQLARLTGQPVPAGEGNVAGALRDSLCLLQ
KSYRFGRHSGIGHLAWAVNSGERSAVRATLRQSFDDIALYPLSATEEYEAMLNQAQAGYG
RFLQLLRARAEPEEMIAAFGEFQLLCALREGPYGVSGVNEQLEQMLNRKRAIALPRHSRW
YEGRPVMISRNDSALGLFNGDIGIALERGDGLRVWFPMPDGSIKSVQPSRLPEHDTAWAM
TVHKSQGSEFDHAALILPSRSVPLVTRELVYTAITRAKRQLSIYADEQVLTQAVAARTER
RSGLTDIFSAQ
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgaccatggatgaactgttactgcaggcggttgaacagcgcctgctgcgcccgctggac
gtccagtttgcgctcatggtggcgcaggaggcgcatccggcagtgaagctcaccgccgcc
attctcagccgcgatgccggtgaaggccacgtctgcctgccgatttcgcgtctcgccgag
gatgagctgctgagcgcaaaagcggcaggcctgagtgagcagatccttgagctgaccggc
gccccggacggatggctgccgctgcttaacgatgctgaggcggtcagcggcggtgagcgc
ccgacgccgatgatcctctgcggcgaacggctttacctcaaccgcatgtggcgcaacgaa
ttaaccgttgcgcgctttttcaatgaggccaatcaggtgctggaggtggatgaagcccgg
ctggcttcgacgctcgacgcgctgtttccgcccgctgaggaaacggactggcaaaaagtg
gcggctgcggtcgccctgacccgacggatttcggtgatttccggcggtccgggtaccggt
aaaaccacgaccgtcgctaaactgctggccgcgctgatccagacattctccagcccgcgc
tgccggattcgcctggcggcgccgaccggtaaagccgcggcgcgcctgaccgagtccctc
ggcgctgcgctgcgccgcctccctctcagcgaccaacaaaaggcgctggtgcccaccgaa
gccagcaccctccatcgcctgctgggcgcgcagcccggcagccagcggatgcgctatcac
gccggcaacccgctgcatcttgacgtgctggtggtggatgaagcctctatgattgacctg
ccgatgatgtcgcgcctgatcgacgcgctgcctgagcacggaagggtgattttccttggc
gaccgcgatcagctggcgtcggtagaggccggagcggtgctgggggatatttgcgcctgg
gttaatgcaggctataccccggcgcgggcggcacagctcgcccggttgaccggccagccg
gtaccggcgggcgagggcaacgttgccggtgcgctacgcgacagcctgtgcctgctgcaa
aaaagctaccgttttggtcgccattccggtatcggccatctggcgtgggcggtgaacagc
ggcgagcgcagcgcggtacgcgcaacgctgcgtcagtcgttcgacgatatcgccctgtat
ccgctgagcgccaccgaagagtatgaagcgatgctgaatcaggcgcaggcgggctacggc
cgcttcctgcagctgctgcgcgcgcgggctgagcccgaagagatgatcgccgcctttggc
gaattccagctgctgtgcgcgctgcgcgaggggccgtatggggtcagcggcgtgaacgaa
cagctggagcagatgctgaaccgcaagcgggcgatcgcgttaccgcggcattcgcgctgg
tatgaaggacggccggtgatgatctcccgcaacgacagcgcgctggggctgtttaacggc
gatatcggcatcgcgctggaaagaggcgatggcctgcgcgtctggttcccgatgcccgac
ggcagcatcaagtcggtacagccaagtcgtctgccggagcacgataccgcctgggcgatg
acggtgcataaatcgcaggggtcggagttcgatcacgcggcgctgatcctgccttcgcgc
agcgtgccgctggtaacccgcgagctggtttataccgccattacgcgtgcgaaacggcag
ctgtcgatctatgccgatgagcaggtgctgactcaggcggtggctgcgcgtaccgaacga
cgcagcggcctgacggatatcttttccgcccagtga
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