Klebsiella oxytoca KONIH1: KONIH1_26770
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Entry
KONIH1_26770 CDS
T03269
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
kok
Klebsiella oxytoca KONIH1
Pathway
kok03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
kok00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
KONIH1_26770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kok03021
]
KONIH1_26770
03400 DNA repair and recombination proteins [BR:
kok03400
]
KONIH1_26770
Enzymes [BR:
kok01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
KONIH1_26770
Transcription machinery [BR:
kok03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
KONIH1_26770
DNA repair and recombination proteins [BR:
kok03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
KONIH1_26770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
AID92569
LinkDB
All DBs
Position
complement(5592118..5593107)
Genome browser
AA seq
329 aa
AA seq
DB search
MQGSVTEFLKPRLVDIEQVSSTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSTKEGVQEDILEILLNLKGLAVRVQGKDEVILTLNKSGIGPVTAADITHDGD
VEIVKPQHVICHLTDENAAISMRIKVQRGRGYVPASARIHSEEDERPIGRLLVDACYSPV
ERIAYNVEAARVEQRTDLDKLVIEMETNGTIDPEEAIRRAATILAEQLEAFVDLRDVRQP
EVKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSL
TEIKDVLASRGLSLGMRLENWPPASIADE
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcagggttctgtgacagagtttctaaaaccgcgcctggtcgatatcgagcaagtgagt
tcgacgcacgccaaggtgacccttgaacctttagagcgtggctttggccatactcttggt
aacgcactgcgccgtattctgctctcatcgatgccgggttgcgcggtgaccgaggttgag
attgatggtgtacttcatgagtacagcaccaaagaaggcgttcaggaagatatccttgaa
atcctgctcaacctgaaagggctggcggtgagagttcagggtaaagatgaagttatcctt
actttgaacaaatctggcattggccctgtgaccgcagccgacattacccatgacggtgat
gtcgaaatcgtcaagccgcaacatgtgatctgccacctgaccgatgagaacgcagctatt
agcatgcgtatcaaagttcagcgcggtcgcggttatgtgccggcttctgcccgaattcat
tcggaagaagatgagcgcccaatcggccgtctgctggtcgacgcatgctacagccctgta
gagcgtattgcctacaatgttgaagcagcgcgtgtagaacagcgtaccgacctggacaag
ctggtcatcgaaatggaaaccaacggcacaatcgatcctgaagaggcgattcgtcgtgcg
gcaaccatcctggcagaacaactggaagctttcgttgatttacgtgatgtacgtcagccg
gaagtgaaagaagagaaaccagaattcgatccgatcctgctgcgccctgttgacgatctc
gaattgactgtccgctctgctaactgccttaaggcagaagctatccactatatcggtgat
ctggtacagcgtaccgaggttgagttgctgaaaacgccgaacctgggtaaaaaatctctt
actgagattaaagacgtgctggcttcacgtggtttgtctctgggcatgcgcctggaaaac
tggccaccggcaagcattgctgacgagtaa
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