Klebsiella oxytoca KONIH1: KONIH1_28460
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Entry
KONIH1_28460 CDS
T03269
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
kok
Klebsiella oxytoca KONIH1
Pathway
kok03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
kok00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KONIH1_28460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kok03400
]
KONIH1_28460
Enzymes [BR:
kok01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
KONIH1_28460
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
KONIH1_28460
DNA repair and recombination proteins [BR:
kok03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KONIH1_28460
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
zf-B_box
zf-C2H2_OTU1_C
Motif
Other DBs
NCBI-ProteinID:
AID92893
LinkDB
All DBs
Position
complement(5944006..5944815)
Genome browser
AA seq
269 aa
AA seq
DB search
MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRWPVSEEIYRLSDVPVLSVRRRAKYLL
LELPDGWIIVHLGMSGSLRILSEELPAEKHDHVDLVMSNGKVLRYTDPRRFGAWLWTKAL
EGHPVLAHLGPEPLSDEFNADYLQAKCAKKKTAIKPWLMDNKLVVGVGNIYASESLFSAG
IHPDRLASSLSREECEQLVKVIKLVLLRSIEQGGTTLKDFLQSDGKPGYFAQELQVYGRK
GEPCRICGTPVIGSKHAQRATFYCRQCQK
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattacctgaagtagaaaccagccgccgcggcattgagccgcacctggtggga
gccaccatcctgcacgccgttgtgcgcaacgggcgcctgcgctggcccgtttctgaagag
atctatcgtctgagcgacgttccggtgctcagcgtacgccgccgcgctaaatatctgctg
ctggaactgcccgacggctggattatcgtccaccttgggatgtcgggaagcctgcgtatc
ctgagcgaagagctgcccgcggaaaaacacgatcacgtggacctggtgatgagtaacggc
aaggtgctgcgctataccgacccgcgtcgttttggcgcctggctgtggaccaaagcgctg
gaagggcatccggtgctggcgcatctggggccggagccgctgagcgatgagttcaacgcc
gattatctgcaggcgaagtgcgcgaagaaaaaaaccgcgattaagccctggctaatggat
aataagctggtggtcggggtgggcaatatctacgccagcgaatcgctcttttcggcgggt
attcaccccgacaggctggcttcttcgctgtcgcgcgaggagtgcgagcagctggtgaaa
gtgattaagctggtcctgctgcgatccatcgaacagggcgggacgacgctgaaagatttc
ctgcaaagcgacggtaaaccgggctactttgcccaggagctgcaggtgtatggccgcaag
ggcgagccgtgccgcatttgcgggacgccggttatcggcagtaaacacgcccagcgggcg
acgttttattgtcgccagtgccagaagtaa
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