Kosmotoga olearia: Kole_0273
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Entry
Kole_0273 CDS
T00914
Name
(GenBank) apurinic endonuclease Apn1
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
kol
Kosmotoga olearia
Pathway
kol03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
kol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Kole_0273
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kol03400
]
Kole_0273
Enzymes [BR:
kol01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
Kole_0273
DNA repair and recombination proteins [BR:
kol03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Kole_0273
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
UvdE
Motif
Other DBs
NCBI-ProteinID:
ACR78998
UniProt:
C5CD54
LinkDB
All DBs
Position
299067..299933
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AA seq
288 aa
AA seq
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MIIGAHMSTSRGFDKVPQASLNIGGNTFQIFPHSPSMWRAKLPDDTTARNFKYRLAESGI
KPEDTLVHSGYLINLASPKPEVWEKSVELLDLEIKIVEVLGLKYLNFHPGSHLGTGLDEG
ISRIAKGIDVVLSRNEDSKVILLLENVAPKGGNIGSTFNELRRIIETCSYPERVMITYDT
CHGFDAGYDIRSKAAVEKLLEEIDSEVGLNRFVMIHLNDSKYPLGAAKDRHERIGEGYIG
NEGFYHFLSNPEILKRPLILETPGKDPEHAEDIKRVKEILGENGDSDD
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgataatcggtgctcacatgtcaacatccagggggttcgacaaagtacctcaagccagt
ttgaacatcggcggaaatacgtttcaaatatttccccacagcccatcaatgtggcgagca
aaacttcctgatgatactacagcgagaaattttaaatacaggctggcggaatcgggtata
aaacctgaagatacgttggttcactctggatatttaataaacctggcctcaccaaaaccc
gaagtctgggaaaaatcagtggaactgcttgatttagaaataaaaatcgtcgaagtcctt
ggattaaaatatctgaattttcatcccggaagccatcttggaacgggtttggacgaaggt
atatccagaatcgctaaaggcattgatgtggtactctcacgcaatgaagatagcaaagtt
atccttctcttagaaaacgtggcaccaaaaggcggaaacatcggcagcactttcaatgaa
ctgcgcaggatcattgagacatgttcctatcccgaaagggtaatgataacctacgatacc
tgccacggcttcgatgctggatatgatatccgaagcaaagctgccgttgaaaagcttctt
gaagaaatagattccgaggtcggccttaatagatttgttatgatccacctcaacgattct
aaatatcctcttggcgcggcaaaagatcgacatgaacgcatcggggaaggttacatcggt
aatgaaggtttttaccatttcctttcaaacccggagatactaaaacgacctttaatactg
gaaaccccgggaaaagatccagaacatgctgaagacataaaacgagtaaaagagatcctt
ggagagaacggtgatagcgatgactaa
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