Kosmotoga olearia: Kole_0343
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Entry
Kole_0343 CDS
T00914
Name
(GenBank) RNA polymerase, sigma 70 subunit, RpoD subfamily
KO
K03086
RNA polymerase primary sigma factor
Organism
kol
Kosmotoga olearia
Pathway
kol02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
kol00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Kole_0343
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kol03021
]
Kole_0343
Transcription machinery [BR:
kol03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Kole_0343
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
ACR79068
UniProt:
C5CDI4
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All DBs
Position
362395..363612
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AA seq
405 aa
AA seq
DB search
MADKKNKAKMVEEPKEKNSSQKKTTEVVMLSDKEVQSRIKKLVKLGKKKGYITYEDIDNA
FPPDYEGFDSSLVEVIYEELEKNKVRILEKEPTEDQEESGQENPAEDIETLLESAPEMYD
NISLKDPIKMYLKEIGKIPLLTPSKERELARRAQKGDKKAREELITANLRLVVSIAKRYI
GRGLSFLDLIQEGNIGLIKAVEKFDWKKGYKFSTYATWWIRQAITRAIADQARTIRVPVH
MVETINKVNKVIREHLQEHGEYPTVEELGKLTGKTPEKIEEILAASKETVSLESPISGDE
ESTMGDFVHDESIEKPEEAAIKMLLREQIDEVLDTLSPREAMVLKMRYGLLDGKTKTLEE
VGQFFNVTRERIRQIEVKALRKLRHPSRSKQLKALLGMLNSSKSE
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggcagataaaaagaataaggcaaaaatggtggaggaaccaaaagaaaaaaactcttca
caaaagaaaacaactgaagtagtcatgctttcagacaaagaggttcaatcacgaatcaaa
aaactcgttaaattgggaaaaaagaagggttatataacctatgaagatatagacaatgcc
tttcccccggattatgagggatttgattcttcattggttgaagtaatctacgaggaatta
gaaaagaacaaggttcgaatactggagaaagaacccaccgaggatcaggaagaaagcgga
caggaaaatccggccgaagatatagaaacacttctcgaaagtgctccagagatgtatgac
aacatatctctaaaagatcctataaagatgtatctgaaagaaattggcaagatccctctg
ttaacaccaagtaaagaaagagaattggcaaggagagcacaaaagggtgataaaaaagcg
agagaagaacttataacagctaatttgcgtctcgttgtttctatcgccaaaagatatata
ggtagaggcttatctttccttgaccttatacaggaaggaaatataggtctcataaaagct
gttgaaaaattcgattggaagaaaggatacaagttcagcacctacgctacctggtggatc
aggcaggcaataacccgtgctattgctgaccaggcaagaactatacgagttcccgtacac
atggttgaaaccatcaacaaggtgaacaaggtgatccgtgaacatcttcaggaacacgga
gaatatccaacggttgaagaattgggtaaattaacaggaaaaaccccggaaaaaatagaa
gaaatccttgctgcttcaaaagaaaccgtttcgctcgagtcacctatcagcggtgacgaa
gaatccaccatgggagatttcgttcatgatgaatccatcgaaaaacccgaagaagcagca
ataaaaatgctcctgcgtgagcaaatcgacgaagttttagatactttgagcccgagggaa
gccatggtcttgaaaatgagatatggtcttctcgatggaaaaacaaaaactttagaagag
gttggacaattctttaatgttaccagagaaagaattagacagattgaggttaaagctttg
agaaaacttagacatccgtcaagaagcaaacagctcaaagcactgcttggaatgctaaat
agctcaaaatcagagtag
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