Kosmotoga olearia: Kole_1563
Help
Entry
Kole_1563 CDS
T00914
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
kol
Kosmotoga olearia
Brite
KEGG Orthology (KO) [BR:
kol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kol03016
]
Kole_1563
Enzymes [BR:
kol01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
Kole_1563
Transfer RNA biogenesis [BR:
kol03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
Kole_1563
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
ACR80253
UniProt:
C5CES3
LinkDB
All DBs
Position
1674861..1675487
Genome browser
AA seq
208 aa
AA seq
DB search
MPVVVVISGFLVRSLKGGSKLRTFIAIDTGKGVASVVDMVVDKLKRMGFKASWVPGSNAH
LTLSFLGEIEFSKVEILASMLSKRLRGFPSFTFSTKQLGFFRHNNLPRVIWIGVENTPFL
NNLHREVRVALGSLGLAAEDKFHPHITVGRMKYSPPYWKKLLATIELEEIVVPVNGVHIY
ESELLSEGANYRKIFSCNFEGGLVKHEF
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
ttgccagtggtggtagttatttcaggatttctggtaagatctttgaaggggggaagtaaa
ttgaggacctttatagccatagatactggtaaaggtgttgcttcggttgttgatatggtt
gtcgataaactgaaaaggatgggttttaaagcttcatgggtaccgggaagcaacgctcat
ttaacgctttcatttttgggtgagatagagtttagtaaagttgaaattcttgcttctatg
ctttcaaagaggttaagaggttttccttctttcactttttctacgaaacagctcggcttt
tttagacacaacaatctgccaagggtaatatggataggcgtggaaaacactcctttcttg
aacaatctacatcgtgaagtacgggtggctcttggaagtttgggactggcagcagaagac
aagtttcatccccatattaccgttggacgaatgaagtacagtcccccatactggaaaaaa
ttattagcgacgatcgaactcgaggaaattgtggtacctgtaaatggagttcacatctat
gaatcggaacttttgagcgaaggtgctaattacaggaaaatcttcagttgtaattttgaa
ggaggcctggttaaacatgaattctag
DBGET
integrated database retrieval system
