Kosmotoga olearia: Kole_1566
Help
Entry
Kole_1566 CDS
T00914
Name
(GenBank) RNA binding metal dependent phosphohydrolase
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
kol
Kosmotoga olearia
Pathway
kol03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kol00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Kole_1566
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kol03019
]
Kole_1566
Messenger RNA biogenesis [BR:
kol03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Kole_1566
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
YtxH
DUF4407
KH_KhpA-B
HrpE
Ribosomal_S18
KH_2
AMH_N
dUTPase
FtsA
FUSC
Exonuc_VII_L
Motif
Other DBs
NCBI-ProteinID:
ACR80256
UniProt:
C5CES6
LinkDB
All DBs
Position
1677097..1678629
Genome browser
AA seq
510 aa
AA seq
DB search
MTIIWSLIGSIIGIVISALIFIPIVSRKVRKKLEEELKLAKQDAESIKKRALEEAEHLKK
KAIIEGREELHKQRDEMERELRREREELKQWEERISRREDNLDRKEENLEKLRVELEKER
NEIEKLRQEAENKLYQLAELSPEEAREIVFKRVEERYEYDIAQRYKQIKEQYEEDAAKHA
KWVVVTTIQRYAADYTSEITVSTVSLPSDEMKGRIIGREGRNIRAFEKLTGADLIIDDTP
EVVVISCFNPLRRAIAKLTLEKLVEDGRIHPARIEEMYEKAKREIYAEIKEAGQEALMKV
GIPSMHPELVKLLGRLKYRTSYGQNVLQHSIEVAQIAALMAAELGLNVEKIKRGALLHDI
GKAVDHEIEGSHAIIGGEIVKRYGEKSDVVNMIQYHHGETEALTPEAVLVAAADAVSAAR
PGARRESLDMYIKRLENLENIAKGFANIEKAYAIQAGREIRVIVEPEKVDDVMAEKLAGD
IAKRIEEEMEYPGVIKVTVIRERRSVAYAS
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgacaataatttggtctttaataggttcaatcataggaatagtaatttctgctttgatt
tttattcccattgtttccagaaaggttcggaagaagcttgaggaagagttgaaactggca
aaacaggatgcggaatctataaagaagagggctctggaggaagcagaacatcttaagaaa
aaagccattattgagggacgtgaagaacttcataagcaacgcgacgaaatggaaagggaa
ctgcgtcgtgaacgtgaagaactcaaacagtgggaagaaagaatttccagacgggaagat
aaccttgataggaaagaggaaaatcttgaaaaactgagggtagagctggaaaaggagcgc
aatgagatagaaaagcttcggcaggaagcagaaaacaagctttatcagcttgctgagctg
tctccagaagaggcgagagagatcgtctttaagcgcgttgaagaaaggtatgaatacgat
atagcccagagatacaaacagataaaggaacagtatgaagaagatgcggctaaacatgca
aaatgggtggttgttaccacaatacaaagatatgctgccgactacacaagtgagattacc
gttagtacggtaagtcttccttcggatgaaatgaagggaagaataataggaagggaaggc
aggaacatccgtgccttcgaaaaattaacaggggcagatctgatcatagatgatacccct
gaagtggttgtaatctcgtgtttcaatcctttgcggcgagcaattgcgaaattgacactg
gaaaagcttgtggaggatggaagaattcatccagcaagaatagaagagatgtatgaaaaa
gcgaaacgcgaaatatacgctgaaatcaaagaagccggtcaggaagcactcatgaaggtt
gggataccttcgatgcacccggaactggtaaaacttctcgggcgcttgaagtacagaacc
agttatggtcagaacgttttgcagcactccatagaagtggcacagatcgctgcacttatg
gcggcagagctggggctcaatgttgaaaagatcaaacggggtgctttgcttcacgatatt
ggaaaggctgttgatcatgagatagaaggttctcacgccatcataggcggagaaatagta
aagcgttacggtgagaaatccgatgttgttaatatgatacagtatcaccatggtgagacg
gaggccctaacaccggaagctgttcttgtagcagcagccgatgctgtgtctgcggctcgt
cctggagccagaagagagtctcttgacatgtacataaaacgactcgagaatcttgagaac
attgcaaaagggttcgcaaacatcgagaaggcttacgctattcaggctggaagagaaata
agagtgatagtggaaccggaaaaagttgatgatgtgatggcagaaaaacttgccggagat
attgcaaaacggatagaagaagaaatggagtatccaggtgttataaaagtgacagtcatt
agagagagaaggagcgtggcttacgccagttaa
DBGET
integrated database retrieval system
