Klebsiella michiganensis M1: HR38_01730
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Entry
HR38_01730 CDS
T03349
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
kom
Klebsiella michiganensis M1
Pathway
kom02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
kom00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
HR38_01730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kom03021
]
HR38_01730
Transcription machinery [BR:
kom03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HR38_01730
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r1_1
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
AIE67220
UniProt:
A0ACD8BDY7
LinkDB
All DBs
Position
356992..358836
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AA seq
614 aa
AA seq
DB search
MEQNPQSQLKLLVQRGKEQGYLTYAEVNDHLPEDIVDSDQIEDIIQMINDMGIQVMEEAP
DADDLLLAETNNNTDEDAEEAAAQVLSSVESEIGRTTDPVRMYMREMGTVELLTREGEID
IAKRIEDGINQVQCSVAEYPEAITYLLEQYDRVEAEEARLSDLITGFVDPNAEEDMAPTA
THVGSELSQEEMDDDEDEDEEEDDDSSDDDNSIDPELAREKFAELRTQYELTRDTIKAKG
RSHAAAQEEILKLSEVFKQFRLVPKQFDYLVNSMRIMMDRVRTQERIIMKLCVEQCKMPK
KNFITLFTGNETSETWFNAAIAMNKPWSEKLLDVKEDVQRGLMKLQQIEQETGLTIEQVK
DINRRMSIGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKF
EYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQMLQEMGREPT
PEELAERMLMPEDKIRKVLKIAKEPISMETPIGDDEDSHLGDFIEDNTLELPLDSATTES
LRAATHDVLAGLTAREAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLR
HPSRSEVLRSFLDD
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaaacccgcagtcacagctgaagcttcttgtccaacgtggtaaggagcaaggc
tatctgacctatgccgaggtcaatgaccatctgccggaagatatcgtcgactccgaccag
atcgaagacatcatccaaatgatcaacgacatgggcattcaggtgatggaagaagcaccg
gatgccgatgatcttttgcttgctgaaacgaacaacaatactgacgaagatgcggaagaa
gctgcggcgcaggttctctccagcgttgagtctgaaatcggacgcacaaccgacccagtg
cgcatgtacatgcgtgaaatgggtaccgtcgaactgctgacgcgcgaaggcgaaatcgac
atcgctaaacgtatcgaagacggtattaaccaggttcagtgctcggtggctgaataccct
gaagcgatcacctatctgctggagcagtacgatcgcgttgaagcggaagaagcgcgtctg
tccgatctgatcaccggttttgtcgacccgaacgccgaagaagatatggcgccaacggcg
acgcacgtcggttctgaactctctcaggaagagatggatgacgacgaagacgaagatgaa
gaagaagacgacgacagcagcgatgacgacaacagcatcgaccccgagctggcgcgcgag
aaattcgccgagctgcgtacgcagtacgaactgacccgcgacaccatcaaagcgaaaggt
cgtagccacgccgcagcgcaggaagagatcctcaagctgtccgaagtgttcaaacagttc
cgtctggtaccgaagcagttcgattacctggttaacagcatgcgtatcatgatggatcgc
gttcgtactcaagaacgtatcatcatgaagctgtgcgttgagcagtgcaaaatgccgaag
aaaaacttcatcactctgttcaccggcaacgaaaccagcgaaacctggttcaatgcggcc
atcgccatgaacaagccgtggtcagagaagctgcttgacgtgaaagaagacgttcagcgc
ggcctgatgaaactgcagcagattgaacaagagaccggcctgaccatcgagcaggtaaaa
gatatcaaccgtcgtatgtccatcggtgaagcgaaagcgcgccgtgcgaagaaagagatg
gttgaagcgaacctgcgtctggttatctcgatcgccaagaaatacaccaaccgcggtctg
cagttcctcgatctgatccaggaaggcaacatcggtctgatgaaggcggttgataagttt
gaataccgccgcggctacaagttctccacctacgcaacctggtggatccgtcaggcgatc
acccgctctatcgcagaccaggcgcgcaccatccgtattccggtgcatatgattgagact
atcaacaagctcaaccgtatttcccgccagatgctgcaggagatgggccgcgagccgacg
ccggaagagctggccgaacgcatgctgatgccggaagacaaaattcgtaaggtgctgaaa
atcgccaaagagcctatctccatggaaacgccgattggcgacgatgaagattcgcatctg
ggagatttcatcgaggataacaccctcgagctgccgctggactctgccaccaccgagagc
ctgcgcgccgccacccacgacgttctggctggcctgaccgcccgtgaagcgaaagtcctg
cgtatgcgctttggtatcgacatgaataccgatcacacgctggaagaagtgggtaaacag
tttgacgtaacccgcgaacgtattcgtcagatcgaagcgaaggcgctgcgtaaactgcgc
catccgagccgttctgaagtactgcgtagcttcctcgacgattaa
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