Klebsiella michiganensis M1: HR38_06290
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Entry
HR38_06290 CDS
T03349
Symbol
uvrD
Name
(GenBank) DNA-dependent helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
kom
Klebsiella michiganensis M1
Pathway
kom03420
Nucleotide excision repair
kom03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
kom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HR38_06290 (uvrD)
03430 Mismatch repair
HR38_06290 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kom03400
]
HR38_06290 (uvrD)
Enzymes [BR:
kom01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HR38_06290 (uvrD)
DNA repair and recombination proteins [BR:
kom03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HR38_06290 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
HR38_06290 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AIE68073
UniProt:
A0AB35Q305
LinkDB
All DBs
Position
1306718..1308880
Genome browser
AA seq
720 aa
AA seq
DB search
MDVSYLLDSLNDKQREAVAASRTNMLVLAGAGSGKTRVLVHRIAWLLSVENCSPYSIMAV
TFTNKAAAEMRHRIGQLMGTTQGGMWVGTFHGLAHRLLRAHHLDANLPQDFQILDSEDQL
RLLKRLIKAMNLDEKQWPPRQAMWYINGQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT
GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENN
SGRLGKKLWTDGADGEPISLYCAFNDLDEARFVVNRIKTWQENGGALEQCAILYRSNAQS
RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD
RTLDVVRQTSRDRQLTLWQACRELLKDKVLAGRAASALQRFMELIDALAQETADMPLHVQ
TDRVIKDSGLRMMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAAL
EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGVEEGMFPSQMALDEGGRLEEERRLAY
VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPESCVEEVRLRATVSRPVSHQRMG
TPMAENDTGYKLGQRVRHAKFGEGTIVNLEGSGEHSRLQVAFQGQGIKWLVAAYARLETV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttcttacctgctcgacagccttaatgacaaacagcgtgaagccgttgcggca
tcacgtacgaatatgctggttctggcaggagcgggcagcggtaagacgcgcgtgctggta
caccgcatcgcctggctgctgagcgttgagaattgttccccttactccattatggcggtg
acctttaccaacaaagcggcggcggaaatgcgccatcgtattggccaactgatgggtacc
acccagggcggtatgtgggtcggcactttccacgggctggcgcaccggctgctgcgcgct
catcaccttgacgccaacctgccgcaggacttccagatcctcgacagcgaagaccagctg
cgcctgctcaagcgtctgattaaggcgatgaatctcgatgagaagcagtggccgccgcgt
caggcgatgtggtacatcaacggccagaaagatgaagggctgcgcccgcaccatatacag
agctacggtaacccggttgagcagacctggcagaaagtttatcaggcctaccaggaggcc
tgcgatcgggcggggctggtggatttcgccgaactgctgctgcgcgcccacgagctgtgg
ctcaataagccgcacattcttcagcactaccgcgagcgctttaccaatatcctggtggac
gaatttcaggataccaacaacattcagtacgcgtggatccgcctgctggcgggcgatacc
ggcaaggtgatgatcgtcggcgatgacgatcagtccatttacggctggcgcggcgcgcag
gtggagaacatccagcgcttcctcaacgatttccccggcgcggaaactatccgcctcgag
caaaactatcgctcgaccagcaatatcctcagcgcggccaacgccctgattgaaaacaac
agcgggcgcctggggaaaaagctgtggaccgacggcgccgacggcgagccgatttcgctc
tactgcgcgtttaacgatcttgatgaggcgcgctttgtcgtcaaccgcatcaaaacctgg
caggaaaacggcggggcgctggagcagtgcgcgattctgtatcgcagcaacgcccagtcg
cgcgtgctggaagaggcgctgctgcaggccagcatgccgtatcgtatttatggcggcatg
cgcttcttcgaacgccaggagatcaaagatgcgctctcctatctgcgtctgatcgccaat
cgtaatgacgacgcggcctttgagcgcgtggtgaataccccgacgcgcggtatcggcgat
cgcacgctggacgtggtgcgccagacctcgcgcgaccgtcagctgacgctgtggcaggcc
tgtcgcgagctgttaaaagataaagtgcttgccggacgcgccgccagcgccctgcagcgt
tttatggagctcattgacgccctggcgcaggaaaccgccgatatgccgctgcacgtgcag
accgatcgggtgattaaagactccggcctgcgcatgatgtacgagcaggagaaaggcgag
aaaggccagacgcgcattgaaaacttagaggagctggtgacggcaacgcgccagttcagc
tacaacgaagaagatgaagatttgatgccgctgcaggcgttcctctcgcatgcggcgctg
gaagcgggagaagggcaggcggatacctggcaggatgcggtacagctgatgaccctgcac
tcggcgaaagggctggagttcccgcaggtctttatcgtcggcgtggaagaggggatgttc
ccgagccagatggcgcttgatgagggtggccgcctggaagaagaacgccgcctggcctac
gtcggcgtcacccgcgcgatgcagaagctcacgctgacctatgcggaaacccgccgcctg
tatggcaaagaggtttatcaccgtccgtcgcgctttatcggcgagctgccggagtcgtgc
gtggaagaggtgcggctgcgcgccacggtgagccgtccggtcagccatcagcggatgggg
acgccgatggcggaaaacgacaccggctataagctgggccagcgcgtgcgccatgccaag
tttggcgaaggcacgatcgtgaatctcgaaggcagcggcgaacacagccgcctgcaggtt
gcgtttcaggggcaggggattaaatggctggtcgcggcgtatgcccggcttgaaacagtg
taa
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