Klebsiella michiganensis M1: HR38_09980
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Entry
HR38_09980 CDS
T03349
Name
(GenBank) ATP-dependent helicase HrpB
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
kom
Klebsiella michiganensis M1
Brite
KEGG Orthology (KO) [BR:
kom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kom03019
]
HR38_09980
Enzymes [BR:
kom01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
HR38_09980
Messenger RNA biogenesis [BR:
kom03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
HR38_09980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
CON_HrpB
DEAD
Helicase_C
HA2_N
Motif
Other DBs
NCBI-ProteinID:
AIE68764
UniProt:
A0AB35PX97
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All DBs
Position
2098335..2100764
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AA seq
809 aa
AA seq
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MSSLPVAAVLPELLSALRHAPQVLLNAPTGAGKSTWLPLQILAEGNINGRIILLEPRRLA
ARNVAQRLAELLGEKPGETVGYRMRAETCVGPNTRLEVVTEGILTRMIQRDPELSGVGLA
ILDEFHERSLQADLALALLLDVQQGLRDDLKLLIMSATLDNERLQRLLPEAPVIVSEGRA
FPVERRFLPLPAHQRFDEAVAVAAAELLRSENGSMLLFLPGVGEIQRVQERLAERVASDV
ILCPLYGALPLSEQRKAILPAPAGMRKVVLATNIAETSLTIEGIRLVVDSAQERVARFDA
RTGLTRLVTQRISQASMTQRAGRAGRLEPGICLHLLAKEQAERAAAQGDPEILQSDLSSL
LLELLQWGCQDPAQFSWLDLPPATNLAAARRLLTDLSALEGERLSARGRKMAALGNDPRL
AAMLTAAEDADGAATAAKLAAILEEPPRGGNSDLSAAFARQQGNWQQRAQQLMKRLAVRG
GQPDADSIAALLASAFADRIAHRRGQEGRYQLANGMGAMLDADDALGRHEWLIAPLLLQG
SASPDARILLALPVDIHALIEQCPALARRSDIVEWDEALGTLKAWRRTCIGRLVIKTQPL
AKPSEEELHQAMLNGIREKGLSVLTWTPESEQLRLRLHCAARWLPEEAWPAVDEASLLAS
LEQWLLPQMAGVHSLRALKALDVRQALQNWLPWPLRQKLDSELPTHYTVPTGSRIAIRYH
DENPPALAVRMQEMFGEATTPTIAQGRVPLVLELLSPAQRPLQITRDLGAFWQGSYREVQ
KEMKGRYPKHVWPDDPANTAPTRRTKKYS
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
gtgtcctcattgccggttgccgccgtcctccctgaacttctttctgccctgcggcatgcg
ccgcaggttctgcttaatgcgccaaccggcgccgggaaatccacctggctgccgctgcaa
atcctcgccgaaggtaacatcaacggacgcataatcctgctggagccgcggcggctggcc
gcgcgtaacgtggcgcagcggctggcggaactgctgggagagaagcccggcgagaccgtg
ggctatcgcatgcgcgcggagacctgcgtcgggccgaacacgcgcctcgaagtggtgacg
gagggcattttaacgcggatgatccagcgcgatccggagctgagcggcgtggggctggcg
atcctcgatgaattccacgaacgcagcctgcaggcggatctggcgctggcgctgctgctc
gacgttcagcaggggctgcgcgacgatctcaaactgctgattatgtcggcgacgctggac
aatgaacgcctgcagcggctgctgccggaggcgccggttatcgtttccgaagggcgcgcg
tttccggttgagcggcgttttctgccgctgccggcccatcagcgctttgacgaggcggtg
gcggtggccgccgcggagctgctgcgcagcgaaaatggctcaatgctgctgtttctgccc
ggggtgggagagattcagcgcgttcaggagcggctggcggagcgggtggcgagcgatgtg
atcctttgccccctgtacggcgcgctgccgctgagcgagcagcgtaaggcgatactgccc
gcgcccgccgggatgcgcaaagtggtgctggcgaccaatatcgccgagaccagtctgacc
atcgaggggattcggctggtggtggatagcgcccaggagcgcgtcgcccgctttgacgcc
cgcaccgggctcactcgcctggtgacgcagcgcatcagccaggcctcaatgacccagcgc
gccggacgcgccgggcgcctggaaccggggatctgcctgcatctgctggctaaagagcag
gccgagcgcgcggcggcgcagggcgacccggaaattctgcaaagcgatctgtcgtcgctg
ctgctggagctgctgcagtggggatgccaggacccggcccagttcagctggctggatctg
ccgcctgcgaccaacctggcggcggcccggcgtctgctcaccgacctttctgcgctggaa
ggcgagcggctgtcggcgcgcgggcgcaaaatggcggcgttgggcaacgatccgcgcctg
gcggcgatgctgaccgcggcggaggatgccgatggcgccgccacggcggctaaactggcg
gcgatccttgaagagccgccgcgcggcggcaatagcgatcttagcgcggcgtttgcccgt
cagcagggtaactggcagcagcgggcgcagcagctgatgaaaaggctggcggttcgcggc
ggtcagcccgatgccgacagcatcgcggcgctgctggcctccgcttttgccgaccgtatc
gcccatcgtcgcggccaggaggggcgctaccagctggctaacgggatgggggcgatgctc
gacgccgacgatgcgctgggccgccacgaatggctgattgcgccgctgctgctgcaggga
agcgcatcgccggacgcgcggatcctgctggcgctgccggtcgatattcacgcgttgatt
gagcagtgtccggccctggcccggcgttccgatatcgtcgagtgggatgaggcgttagga
acgctgaaggcctggcggcgcacctgtatcggacgcctggtgattaagacccagccgctg
gcgaagccgtcggaagaggagctgcaccaggcgatgctcaacgggatccgcgagaaggga
ctgagcgtgctaacctggacgccggagtcggagcagctgcgtctgcggctacactgcgcg
gcgcggtggctgccggaggaggcgtggccggccgttgacgaggcgtcgctgctggcctcg
cttgaacagtggctgctgccgcagatggcgggcgtccattcgctgcgcgccctgaaggcg
ctggacgtgcgtcaggcgctgcaaaactggctgccgtggccgctgcgccagaagctggac
agcgagctgcccacgcactatacggtgccgaccggtagccgcatcgcgattcgttatcac
gatgaaaacccgccggcgctggcggtgcggatgcaggagatgtttggcgaagcgaccact
ccgactatcgcccaggggcgcgtgccgctggtgctggagctgctttcgccggcgcagcgc
ccgctgcagatcacccgcgatttaggcgccttctggcaggggagctaccgcgaggtgcaa
aaagagatgaaagggcgctatcccaagcacgtctggcccgacgatccggccaataccgcc
ccgacccggcgcaccaaaaagtattcgtag
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