Klebsiella michiganensis M1: HR38_13290
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Entry
HR38_13290 CDS
T03349
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
kom
Klebsiella michiganensis M1
Brite
KEGG Orthology (KO) [BR:
kom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kom03400
]
HR38_13290
Enzymes [BR:
kom01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
HR38_13290
DNA repair and recombination proteins [BR:
kom03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
HR38_13290
Prokaryotic type
HR38_13290
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AIE69385
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Position
2825119..2826567
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AA seq
482 aa
AA seq
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MATHLVWFRADLRIHDNLALAAACRDPHAEVLGLFIATPGQWRQHGMAPRQAAFMVSHLH
SLQAALAEKGIPLQIEHAADFTASVALLARICRQRQVTHLFYNYQYEINERQRDAAVEKT
LAEVTCQGFDDSVLLPPGSVLTGSREMYKVFTPFKNAFIRRLQEALPECVAAPKVRAGGP
IAAASEVKIDYPQTPFDSELFAADEKSAIARLRGFCQQKAADYEQQRDLPAIEGTSRLSP
CLAVGALSPRQCLHRLRVEQPRALDGEAGSVWLNELIWREFYRHLMVYYPNLCKGRPFID
WTDNVAWLDDKSALQAWQRGQTGFPIVDAAMRQLNATGWMHNRLRMIVASFLVKDLRIDW
RLGERYFIEQLIDGDLAANNGGWQWAASTGTDAAPYFRIFNPTTQGERFDKAGQFIRQWL
PELAGVPEKAVHQPWLWAEKQGVTLDYPRPIVDHKQARLATLAAWEAARELKTPSPGDES
GS
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggccacccatctggtctggtttcgcgcggatttgcgcatccacgataacctggcgctc
gccgccgcctgccgcgatccccatgccgaggtgctgggattatttatcgccacgccaggg
caatggcgccagcacggtatggcgccgcgccaggcggcgtttatggtcagccaccttcac
agcctgcaagcggcgctggccgaaaaggggatcccgctgcagattgaacatgccgcagat
ttcaccgccagcgtggcgctgctcgccagaatttgccggcagcggcaggtgacccatctg
ttttacaactaccagtacgaaatcaatgaacgccagcgcgatgcggcggtggagaaaacc
ttagcggaggtgacctgtcagggctttgatgacagcgttctgctgccgccgggtagcgtg
ctgaccggcagtcgtgaaatgtataaggtctttacgccgtttaaaaatgcctttattcgc
cgtttgcaggaagcgctgccggagtgcgtcgccgcgccgaaagtccgcgcgggcgggccc
atcgctgcggcgtctgaagtgaaaatagattatccgcagacgccatttgatagcgagctg
ttcgccgcggatgaaaaaagcgccatcgcccggcttcgcggcttctgccagcaaaaggcc
gccgactatgagcagcagcgcgatcttcccgccatcgaggggaccagccgactgtcgccg
tgcctggcggtgggcgcgctctcaccgcgccagtgcctgcaccgtttgcgggttgagcag
ccgcgggcgctggatggcgaagccggatcggtatggctcaacgagcttatctggcgcgag
ttttatcgtcacctgatggtttactacccaaacttgtgtaaggggcggccttttatcgac
tggaccgataacgtggcgtggctggacgataaatccgcgcttcaggcctggcagcgcggg
caaaccggcttcccgattgtcgacgccgcaatgcgtcagcttaatgcgaccggctggatg
cataaccgcctgcggatgattgtcgccagttttctggtgaaagacctgcgcatcgactgg
cggctgggcgagcgctactttatcgaacaacttattgatggcgatctggcggcgaataac
ggcggctggcagtgggcggcttcaacgggtaccgatgccgcgccctattttcgtattttt
aacccgacgacccagggagagcgcttcgacaaagcggggcagtttattcgtcaatggctg
ccggagctggccggggtacctgaaaaagcggtgcatcaaccgtggctgtgggcggagaaa
cagggcgtaacgctggattatccgcgcccgattgttgaccacaagcaggcgcggctggcg
acgctggcggcctgggaagccgccagagagcttaagactccatcgccaggcgacgagtcc
ggatcttaa
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